Stylophora pistillata (Smooth Cauliflower Coral): 111343459
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Entry
111343459 CDS
T05774
Name
(RefSeq) replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis03030
DNA replication
spis03410
Base excision repair
spis03420
Nucleotide excision repair
spis03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111343459
03410 Base excision repair
111343459
03420 Nucleotide excision repair
111343459
03430 Mismatch repair
111343459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spis03032
]
111343459
03036 Chromosome and associated proteins [BR:
spis03036
]
111343459
03400 DNA repair and recombination proteins [BR:
spis03400
]
111343459
DNA replication proteins [BR:
spis03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
111343459
DNA Replication Termination Factors
ELG1-RFC complex
111343459
Chromosome and associated proteins [BR:
spis03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
111343459
DNA repair and recombination proteins [BR:
spis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
111343459
Check point factors
HRAD17(Rad24)-RFC complex
111343459
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
AAA_14
AAA_16
Rad17
AAA_24
Viral_helicase1
Mg_chelatase
AAA_11
RuvB_N
nSTAND3
AAA_19
AAA_18
DEAD
MipZ
ABC_tran
AAA_5
AAA_assoc_2
AAA_25
AAA_30
FtsK_SpoIIIE
AAA_23
AAA_28
MeaB
RNA_helicase
bpMoxR
SLFN-g3_helicase
Gp44_lid
NTPase_1
DNAX_ATPase_lid
ATPase_2
AAA_3
IstB_IS21
DUF815
AAA_2
Motif
Other DBs
NCBI-GeneID:
111343459
NCBI-ProteinID:
XP_022806383
LinkDB
All DBs
Position
Unknown
AA seq
345 aa
AA seq
DB search
MADEMDVETSTTGSKSSKDEAMEVDLPQVDRVTSKGSSGAGSSTGKSSKGFELPWVEKYR
PTKLQEIVGNEETVSRLEVFAEQGNVPNIIIAGPPGTGKTTSILCLARALLGTSFKDAVL
ELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSK
TTRFALACNTSEKIIEAIQSRCAVLRYSRLTDAQVLHRLLEVCEKEQVTKTDDGLEAIVF
TAQGDMRQAINNLQSTFYGFGFVNSENVFKVCDEPHPLLIREMIKSCSTGDIDEAYKVLS
HLWYMGYAPEDIITNIFRVCKNYQMSEYLKLEFIKVRRTVKLCKH
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgagatggacgtggaaacatcgacaacgggctctaaaagttctaaagacgaa
gcaatggaagtagatttaccacaagtagacagagtaacaagtaaggggtcatctggtgca
ggtagtagcactggaaaaagctccaaaggcttcgaactgccgtgggtggaaaaataccga
ccaaccaaactgcaggaaatagttggaaatgaagaaactgttagtcgcttagaggttttt
gcagagcaaggaaatgttccgaacatcatcattgcgggtccccctggtacaggaaagacc
acaagtatcttatgtttggccagggcacttttgggcacttcattcaaagatgctgtgctt
gaactaaatgcatctaatgacagaggaattgatgtggtgcgtaacaagattaagatgttt
gctcagcagaaagttactttaccaaaaggcaggcacaaaattataattttggatgaagca
gacagcatgacagatggtgcacaacaggctcttagaagaacaatggaaatctactccaaa
actacacgctttgctctggcttgcaacacatccgagaaaattattgaggcgatccagtcc
agatgtgctgttctacgatattcaagattgactgatgcacaagtcttacacagactttta
gaagtttgtgaaaaagaacaggtcaccaaaactgatgatggattggaagcaattgtcttc
acagctcaaggggatatgagacaggcgataaacaacctgcaatctaccttttatggattt
ggatttgttaacagtgaaaatgtgtttaaggtttgcgatgaaccgcatcctctgttgatt
cgagagatgatcaagtcatgttcaacaggggacattgacgaagcttacaaggttctctca
catttgtggtacatggggtatgctccagaggacatcataaccaacatcttccgagtgtgc
aagaactatcagatgtcagaatacctcaaactggagtttattaaggtaagacgaactgtt
aagctgtgcaagcattag
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integrated database retrieval system
