Stylophora pistillata (Smooth Cauliflower Coral): 111344292
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Entry
111344292 CDS
T05774
Name
(RefSeq) protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111344292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spis03019
]
111344292
Enzymes [BR:
spis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
111344292
Messenger RNA biogenesis [BR:
spis03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
111344292
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
ATP_bind_1
AAA_16
AAA_22
AAA_24
nSTAND3
CbiA
AAA_18
NTPase_1
MMR_HSR1
GTP_EFTU
AAA_10
Motif
Other DBs
NCBI-GeneID:
111344292
NCBI-ProteinID:
XP_022807245
LinkDB
All DBs
Position
Unknown
AA seq
428 aa
AA seq
DB search
METEQENGPPEERQQWKLEKDSELRIEIPEGKGKAEVVLLQGQGEVFGTELVRNKKFTFK
AGSNVAIFTWHGCTVEISGPVDAYISKETPMVMYLNLHMGLEQMRRKAEAVAEPETGPRV
MVTGPVDVGKSTLCKLLLNYAVRSGRRPVFVDLDVGQGYIGVPGSMGALLIERPADIEEG
FPLQAPLVYHYGHTSPGPNEKLYNKLSSKMAEVTKERFDKNKKARVSGCIINTCGWVTGT
GYRIVVHAAEAFEVNVIVVLDQERLYNDLKKQFGSKVQIVHLPKSGGVVVRSQETRREGR
DNRVRDYFYGMNSSFYPHIFEVKFADIKIFKIGAPAVPDSCLPLGMAPDQNETKLVPVQP
GRDLKHCVLALSAAESLEEGLVTTNTIGFVVVNDVDLERQMMVELSPAPRPLPRKFFLLS
DVKFMDFK
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggaaacagaacaagagaacggcccacctgaagaaagacaacaatggaagcttgaaaaa
gactcagaactgcgaattgaaatccctgagggaaaaggaaaagcagaagttgtgttgcta
caaggtcaaggtgaggtgtttggaactgagctggtgaggaacaagaagttcactttcaaa
gctggatcaaatgttgctatttttacttggcacggttgcactgtagaaatctctggccct
gttgatgcatatatctcaaaagaaacaccaatggtcatgtacttgaatcttcacatggga
ctggagcagatgagacggaaagctgaagctgttgcggaaccagagactggtccaagggtg
atggtgactggccctgttgatgttggaaagtcaacactttgtaagcttctgttgaattac
gctgtaagatcggggagaagaccggtatttgttgatctggatgttggtcagggatatatt
ggggtccctggatctatgggtgctcttttaattgagagacctgctgatattgaagaagga
tttccacttcaagcaccactagtttatcattatggtcacacatcaccaggtcccaatgag
aagctttacaacaagctatccagcaaaatggctgaagtcacaaaagagaggtttgacaag
aataagaaggctcgagtcagtggatgtattatcaacacctgtggctgggtgacaggaact
ggttatagaattgtggtgcatgctgctgaagcatttgaagtgaatgttattgttgttctt
gaccaagagagactgtacaatgatctaaagaaacagtttggcagcaaggttcagattgtg
catcttccaaaatctggtggggtggtggtaagaagtcaagagactagaagagaaggaagg
gataacagagttagagactacttttatggaatgaactccagtttttatccgcacattttt
gaggtcaaatttgctgacataaagatttttaagattggggctcctgctgttcctgattca
tgtctgccacttggaatggctccagaccagaatgaaaccaaactggtcccagtacaacca
gggcgtgatttaaagcactgtgttttggcattgagtgctgctgagtcattagaagaaggt
ttagttacaacaaacacaataggctttgttgttgttaatgacgttgatttggaacgtcag
atgatggtggagctgtctccagctccaaggcctctaccaagaaagttctttctgctcagt
gatgtcaagtttatggacttcaaataa
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