Stylophora pistillata (Smooth Cauliflower Coral): 111344850
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Entry
111344850 CDS
T05774
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis03013
Nucleocytoplasmic transport
spis03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111344850
09122 Translation
03013 Nucleocytoplasmic transport
111344850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spis03019
]
111344850
03041 Spliceosome [BR:
spis03041
]
111344850
Messenger RNA biogenesis [BR:
spis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
111344850
Spliceosome [BR:
spis03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
111344850
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
RWD
UEV
Motif
Other DBs
NCBI-GeneID:
111344850
NCBI-ProteinID:
XP_022807852
LinkDB
All DBs
Position
Unknown
AA seq
695 aa
AA seq
DB search
MKRRRTRTPSDVGSPSQEKRVVTSPTSSKTTATSASTTTKDSTSKSSDSQNVTNLEDAEV
EKRSAAADVASFEKGTEEIRKLVAEIQKQKLEDSDVSESRIRCTLLFTILKKLNRLAHMR
CKKARERTQESKQKVDSLHLQLQNLLYEVMHLKKEITKCLEFKSKDEEIELVSEAEFFRD
APNEISRPDVTKGDSHKLMLARLDWELEQRKRLAVQKEQFLKKRETLLKEIHTKKEFLDS
LQPRLENILKATQPVQEYMNMPLDAQRAQHETARYLPQALYILYVQASAYNEACDPHMEV
KILGDLDVAKAAMEAKPVVRDIDSDSDQENTEGHKRSKHRRKKEEARLEEKRKLLLKKHP
LQILIQVKCKDKATLDLLFSFLPTFNTVVVSPSLTLNEALSEPVLANSALLSPDSLLINL
FPGDDGNTAPNTSSLYQLSKVGITTFTDFVRFVGKPYMWVQRICGLDFLAEELHEVIPKS
SVSLSHMEATIKAVKARILARLALQQQLTSLENLTIPGNKNALQMFPTKISAKLTSWQPA
TFEEFQEKPEFKRLIEEGFVQESDMLFQAVFERSKVQLGVSVVLSQEYPTTPPLFSLAVT
CGKTVIRDSLTKAIEAEVNVFYPELTEHDSSLNLLANQLRRLQMCLDVYLECGSLNDVEG
AEKFDREKFFLRVKKGRDRGLPLKYDSSQGLFTQR
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtagaagaacgcgcacgccttcagatgtaggtagtccttcgcaggagaagaga
gtggtgacatccccaaccagctcgaaaactaccgccacttctgcttctactacaactaaa
gatagtacttctaaatcttcagatagtcaaaatgttacaaatttagaggatgcagaggtg
gaaaaaagaagtgctgccgctgatgttgcttcgtttgagaaaggaactgaggaaatcaga
aagcttgtagcagaaattcagaagcaaaaactcgaggattcagatgtaagtgagtccagg
ataaggtgcactctcctgtttacaatcttaaaaaaactcaacagacttgcacatatgcga
tgcaagaaagctagagagagaactcaagagtctaaacaaaaagtggatagtcttcacctg
cagttacagaaccttctctatgaagtgatgcacttgaaaaaagaaattacaaaatgtctt
gagttcaagtcaaaagacgaagaaatagagctggtgtcggaagctgaattttttagggat
gctccaaatgaaatatccagacctgatgttaccaaaggagattctcataaattgatgttg
gcaagacttgactgggaactagagcagaggaaaaggttggcagtgcagaaagaacagttt
ctgaaaaagagagaaacactcttgaaagaaattcacaccaagaaagaatttttggacagt
ctacaaccaagattagaaaatatcttgaaggccacacaacctgttcaggagtacatgaac
atgccactggatgctcagcgagcacagcatgaaacagcacgatatctcccccaggccctg
tacattttgtatgtccaagcatcagcatacaatgaggcttgtgatcctcatatggaagtc
aagattcttggtgatttagatgttgctaaagctgccatggaagctaaacctgttgttaga
gacattgacagtgattcagatcaggaaaacacagaaggacacaaaaggtcgaagcatcga
agaaaaaaagaagaggcccgtttggaggagaaaaggaaattgttactcaagaagcatcct
cttcaaatcctaatacaagttaagtgtaaagacaaagcgacacttgatttgttgttctcc
tttttgccaacattcaacactgttgtggtctcaccatcactgactttgaatgaagcacta
tcagaaccagtgttggcaaatagtgcgcttctttcccctgattcacttttaatcaatctg
tttcctggtgatgatggaaacacagctccaaacacttcgagcttgtatcagctttcaaaa
gtcggaattactacttttacagattttgtccgttttgtgggtaaaccttatatgtgggtt
caacggatttgtgggttggactttttggctgaggaactacatgaagttataccaaagtca
tccgttagtttgtctcatatggaagcgaccattaaagccgtcaaagccagaatcttagcc
agactcgctctgcaacaacaactgacctccttagaaaatttaacgattccaggaaataag
aacgctctacagatgtttcccaccaagatttcagccaagttgacctcctggcaacctgca
acgtttgaagaatttcaggaaaaaccggaattcaaaagactaattgaagaaggtttcgta
caagaaagtgacatgctcttccaagctgtgtttgaaagaagcaaagttcaactcggggtc
tcagtggttttgtcccaagagtatccgacaactccgccgcttttctccctcgcagtgacg
tgtggaaagacagtgattagagacagcctcacgaaggcaattgaagcggaagtgaatgta
ttctacccggaactaacagagcacgactcttctttaaatctgttagccaatcagcttcgc
cgcttacagatgtgtcttgatgtctatctggagtgtggaagtctgaacgatgtagaaggt
gcagaaaaatttgatcgtgaaaagttttttcttcgcgtaaaaaagggacgggatcgcggg
ttacctttgaagtacgactcaagccaaggacttttcacccagagatag
DBGET
integrated database retrieval system
