Stylophora pistillata (Smooth Cauliflower Coral): 111345187
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Entry
111345187 CDS
T05774
Name
(RefSeq) uncharacterized protein LOC111345187
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111345187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spis03019
]
111345187
03400 DNA repair and recombination proteins [BR:
spis03400
]
111345187
Enzymes [BR:
spis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
111345187
Messenger RNA biogenesis [BR:
spis03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
111345187
DNA repair and recombination proteins [BR:
spis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
111345187
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA-ATPase_like
Motif
Other DBs
NCBI-GeneID:
111345187
NCBI-ProteinID:
XP_022808194
LinkDB
All DBs
Position
Unknown
AA seq
358 aa
AA seq
DB search
MASFQEAFDVVSNTFRIPSLNAQQKTGIRKIVEERKDVFVNLPTGFGKSLLYQALPLVFD
LTSQEPGHIVVVVSPLVSLMNDQVSHLKELGLKAANVSSLENGGRTRVESCEYPLVYGSP
EAWLKNERWRFMLTNSVYSKKLCAIAVDEAHVVRQWGTSQDNKMAAFLESYSKLYELRSL
APNVPVVALTATATKLTRDTVFNLLNMKNAVEIKESPNKLNVAYVVQYMDKDMELEFYFG
WLTDELKQSQEKTERSIIYCQTIRQCGLLYAAIKALLGVYMFIGNDSKHVLVEMLHSCTP
EGNKHNILESFQSASGTIRLLIATIAFGMGIDCRGVHRVIHFGPSKNVESYVQETDYS
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctttcaagaggcgtttgatgttgttagcaatacatttcgaattcctagctta
aatgcgcagcaaaaaactggaattaggaaaatagttgaggaaagaaaggatgtatttgtc
aatcttccgactggtttcgggaaatctctcctgtatcaagcactaccactcgtgtttgat
cttacctcgcaagagcctggtcatatcgtcgtcgttgtctcaccattggtaagccttatg
aacgaccaagtgtcccacttaaaggagttagggctaaaagcagctaacgtaagttcactt
gagaatggtggacgcactcgtgttgaaagctgcgaatatcccttagtttacggatcccct
gaagcgtggttgaagaacgaacgttggagatttatgctaacgaactctgtgtactccaaa
aaactctgtgccattgccgtggatgaagcgcatgttgtaagacagtggggaacatcacaa
gataataaaatggcagcattccttgagtcttactcaaagctgtatgaactaaggtcactc
gcaccaaacgtgccagtggtagccttgactgcaacagcgacaaaactgaccagagacaca
gttttcaaccttctgaacatgaaaaatgctgtagaaattaaggaaagtccaaataaatta
aatgttgcttatgttgtgcagtatatggataaggacatggaactggaattctattttggc
tggctcactgatgaactgaaacagagtcaggagaaaacagaaagaagtattatttattgc
cagactataagacagtgtggtttactttatgctgccattaaagctctcttaggagtatac
atgttcattggaaatgattcaaaacacgtacttgttgaaatgttgcattcctgcactcct
gaaggcaataagcataacattttggagtcctttcagtctgccagtggtaccatccggcta
cttatagcaacaatagcctttggaatgggcattgattgtcgaggtgttcatagagtcata
cattttggaccctccaagaatgtggagtcctacgttcaggaaactgactattcgtag
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