Stylophora pistillata (Smooth Cauliflower Coral): 111346090
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Entry
111346090 CDS
T05774
Name
(RefSeq) general transcription factor IIH subunit 1-like isoform X1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis03022
Basal transcription factors
spis03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111346090
09124 Replication and repair
03420 Nucleotide excision repair
111346090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spis03021
]
111346090
03400 DNA repair and recombination proteins [BR:
spis03400
]
111346090
Transcription machinery [BR:
spis03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
111346090
DNA repair and recombination proteins [BR:
spis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
111346090
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
ParE_toxin
Motif
Other DBs
NCBI-GeneID:
111346090
NCBI-ProteinID:
XP_022809120
LinkDB
All DBs
Position
Unknown
AA seq
546 aa
AA seq
DB search
MADHETVLLEVINTKHKKNGGTLRLMSNDLLWIPYGSDNPKLSCAYSEIKVQRISPEGSS
KIQIQIVLHDGNSFTFQFTNDSTANAKKERDEAKDLLAQLIPVHRKKANKELEEKNRMLK
DNPELYQLYKDLVVSGVITAEEFWANRTKQNQETQVVQSDQAVGLSSALLADMQPESSGC
NEVKYNLNVDTIEAIFKTYPAVKRKHQEVVPHEMPEKDFWTKFFQSHYFHRDRNNTRAMS
GDIFTECAKEDELEQLSRKLATFSDPLLDLTGASPVPEEGYGLTAEAIDPKNNVATQSLF
RKLNHHSLMVLQTTASGSTVNKEKEKNGKNGEVNERDPPTKKSRLRGMVEYGDLSEQQTR
ELPSLKIADSSKFSQGLIPAISKERGSVHSKLSHTEISKAIESNQREFEHWQPNLPGTLP
SGMACHVLTEMSPGGSLMSTTSETSMQHLVSSSVQAEVKLQYNSLSELLRHFWSCFPIKT
QFLEEKMVKMGQSLEKYRDVKLQQFRNQLPAEEAHLANHLVEMLDTALTKYRTWLEKKSG
AKISSS
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccacgagactgttcttcttgaggtaataaacaccaagcacaaaaagaatggc
ggaaccttgcgtctcatgtccaatgacctgctttggattccttacgggtcagataatccc
aagctgtcttgtgcctactctgaaatcaaagttcaacggataagtccagagggcagctca
aaaatacaaatacagattgttcttcatgacggaaactccttcactttccagtttaccaat
gactcaacagcaaatgcaaaaaaagaaagagatgaggcaaaagacctccttgcacagctc
attccagtccatcgaaaaaaggccaataaagaacttgaagaaaagaacagaatgctgaaa
gataatcctgaattgtatcagctgtataaagatctggttgtcagtggtgttattactgct
gaagaattctgggcaaatagaacaaagcagaatcaggaaactcaggtggtacaatcagac
caggcagttggtttgtcctcggcattgcttgcagatatgcaacccgagagttcaggttgc
aatgaagtcaagtacaatttgaatgtggatactattgaggccatattcaaaacatatcct
gctgtgaaaagaaaacaccaagaggttgtgcctcatgagatgccagaaaaagacttttgg
acaaagttttttcagtcgcattatttccaccgagacagaaataacacaagggcaatgtca
ggtgacatcttcactgaatgtgcaaaggaggatgaactggagcaattgtcaaggaaactt
gcaaccttcagtgatcctttgttggacttaacaggagcgtcaccagttcctgaagaggga
tatggactaactgcagaggcgatagatcccaagaacaacgtagcaactcagtccttgttc
agaaagctgaatcaccacagtttaatggtgttgcaaaccacagcttccgggtccaccgtc
aacaaagaaaaggagaaaaatggaaagaatggcgaagttaatgagagagatccccctaca
aaaaagagtcgtctccgaggaatggtggaatatggcgatttgtctgagcagcaaaccaga
gagctcccaagcttaaaaattgctgattcgtcaaagttttcgcaaggtctgataccggcc
atctcaaaggaaagaggatcagttcactccaagcttagtcacacagagatttccaaagcc
atcgagagtaaccaaagagagtttgaacattggcaaccaaatctacccgggactcttccc
agtggcatggcttgtcacgtcctcacagaaatgtcccccggtggatctttgatgagcaca
acttccgaaacaagcatgcaacatttagtgtcttcgtcagttcaggcggaagttaagctt
cagtacaactcactgtccgagctcctgagacacttttggtcgtgctttcccataaagaca
cagttcttggaggaaaagatggttaaaatgggccaaagccttgaaaagtacagagatgtt
aagctgcagcaattccgcaatcagctacccgccgaggaggctcatctggctaatcacctt
gtagagatgctggacaccgcgcttacaaagtacagaacgtggctggaaaaaaagtcaggc
gctaagatctctagtagctga
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