Spiroplasma sp. TU-14: STU14_v1c01200
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Entry
STU14_v1c01200 CDS
T06095
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
spit
Spiroplasma sp. TU-14
Pathway
spit03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
spit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
STU14_v1c01200 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spit03400
]
STU14_v1c01200 (uvrB)
DNA repair and recombination proteins [BR:
spit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
STU14_v1c01200 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
STU14_v1c01200 (uvrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_7
P-loop_SecA
AAA_22
AAA_30
HerA_C
AAA_19
AAA_5
LAT2
DUF87
Motif
Other DBs
NCBI-ProteinID:
AOX43463
LinkDB
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Position
140713..142677
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AA seq
654 aa
AA seq
DB search
MFKLTANYLPAGDQPLAIEQLTTNLFANKKHQVLLGATGTGKTFTMANVIENYQKPTLVM
AHNKTLAMQLYVELKEMFPENRVEYFVSNFDFYQPEAYVPSKDLYIDKDARQNMELDMMR
LSAFNALTTRKDVIVVASVAAIYGAQDPDEYKKSFFQVDRNQKISKKDLANFLVSSGYVR
NDIELVPGSFSAKGDVIKIVPGWNIKTFIRIDLFGDEIEDLAYIDGLTGDVTQRLSTLTI
FPAQDYITSPERLEEAIKRIEAELKVRLVELEQEGKLIETQRLKQRTEYDLDSLRESGLC
SGIENYSRHLDLRNEGEAPYTLIDFFGDDFLTIIDESHMSLPQIRAMYNTDRSRKETLVN
FGFRLKSAQDNRPLNFDEFNQKLKNVIYVSATPGDYELELVDQKVVEQIIRPTGLLDPTV
EVKGTVGQIDDIIAQIKSRREKNERVFITTLTIRMSEDLTSYLQEQNVKVAYLHSELKTL
ERSQILLDLRKGVYDCIVGVNLIREGIDIPEVSLICILDADKQGFLRNERSLIQTIGRAA
RNASGHVILYADNVSDAMTKAMAETTRRRQIQEEYNRKYHITPTTIIKSIRDYTNIKLHD
DKLQKIKNKKSKEYKTAKEALLYDLRKEMYEASKKLDFERAAELRDIIIEIEAE
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaattaacagctaattatttgcctgcgggtgatcaaccattagcaattgaacaa
ttaacaacaaatttatttgcaaataaaaaacatcaagttttattaggagcaactgggact
ggaaaaacttttacgatggcaaatgttattgaaaattatcaaaagccaacattagtaatg
gctcacaacaagacattggcaatgcaattatatgttgagttaaaagaaatgtttccggaa
aaccgagtggaatattttgtttcaaactttgacttttatcaaccagaagcatatgttccc
agcaaagatttatatattgataaggatgcacgacaaaatatggaattagatatgatgcgt
ttgagtgcttttaatgctttgacaacgcgtaaagatgtaattgttgttgcttcggttgcc
gcaatttatggagcacaagatcctgatgaatataaaaaatctttttttcaagttgatcga
aaccaaaaaattagtaaaaaagatttagcaaattttttagtatcatcaggatatgttcgc
aatgatattgaattagttccagggagttttagtgcaaaaggagatgttattaaaattgtt
ccaggatgaaatattaaaacttttattcgcattgatttatttggtgatgagattgaagac
ttggcgtatattgatgggctaactggagatgtgacacagcggttatcaaccttaacaatt
ttcccagcacaagattatattacttcaccagaacggttagaagaagcaatcaaacggatt
gaagcagaattaaaagttcgtttagtagaattagaacaggaaggaaaacttattgagacc
caacgattaaaacaacgaacagaatatgatttggattcattacgagaaagtggcctttgt
tctgggattgaaaattattcacgacatttagatttacgaaatgaaggagaagctccatat
actttaattgatttttttggtgatgattttttaacaattattgatgaatcccatatgtca
ttaccacaaattcgggcaatgtataatactgatcgcagtcggaaagaaacattggttaat
tttggatttcggttaaagagtgcacaagataatcgcccgttaaattttgatgaatttaat
caaaaattaaagaatgtcatttatgtttcagcaacaccaggtgattatgaattagaatta
gttgatcaaaaagtagttgaacaaattattcgtccaactggtttattagatccaaccgtt
gaggtcaaagggacggttggtcaaattgatgatattattgcacaaattaaaagtcgtcgt
gaaaaaaatgaacgggtgtttattacaactttaacaattcggatgtcagaagatttaaca
agttatttacaagaacaaaatgttaaagttgcttatttacatagtgaattaaaaacatta
gagcgaagtcaaattttattagacttacggaagggtgtttatgattgtatcgttggggtt
aacttgattcgggaaggaattgatattccagaagtatcactaatttgtattttagatgct
gataaacaaggtttcttacgtaatgaacgtagtttaattcagacaataggacgagcagca
cggaatgctagtgggcatgttattttatatgcggataatgtttctgatgcaatgacaaaa
gcaatggcggaaacaacacgtcgtcgtcaaattcaagaagagtataatcgaaaatatcat
attactccaacaacaattattaaaagtattcgtgattatactaacattaaactccatgat
gataagttacaaaaaattaaaaataaaaaatcaaaagaatataaaacagcaaaagaagca
ttactatacgatttacgaaaagaaatgtatgaagcaagtaaaaaacttgactttgaacga
gcagcggaattacgcgatattatcattgaaattgaagcagaataa
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