Spiroplasma sp. TU-14: STU14_v1c03510
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Entry
STU14_v1c03510 CDS
T06095
Symbol
cshB
Name
(GenBank) ATP-dependent RNA helicase CshB
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
spit
Spiroplasma sp. TU-14
Brite
KEGG Orthology (KO) [BR:
spit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spit03019
]
STU14_v1c03510 (cshB)
03009 Ribosome biogenesis [BR:
spit03009
]
STU14_v1c03510 (cshB)
Enzymes [BR:
spit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
STU14_v1c03510 (cshB)
Messenger RNA biogenesis [BR:
spit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
STU14_v1c03510 (cshB)
Ribosome biogenesis [BR:
spit03009
]
Prokaryotic type
rRNA helicases
STU14_v1c03510 (cshB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AOX43694
LinkDB
All DBs
Position
382305..383687
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AA seq
460 aa
AA seq
DB search
MNNFDKLGLKRFLNLGLEQLNFTEPTMVQEKVIPLLLKHQNVICKAHTGTGKTFAFCLPI
LNNLDYEQSSIQSIIVTPTRELAKQIYDNIRFFKTFQPALQVNCFVGGEDIKRQIEQLER
NQPHIMVVTPTRLKDLFDQQSLKLGKLTTFIIDECDMIFDLGFIENVDYLLSKVNPNVQV
SVFSATIPEVLKPFLIKYLKNPHYLDLNANQITNQNITHILIPTKHQERSTILLKLLKTF
DPYLCLIFVNKKEEINKYYDLLLEHNYSVTQLHAGLEPRLRTQVVKRIRNLEYKYVIASD
IAARGIDFVGVSHIISIDLPNDLEYYIHRSGRTGRANYTGYSYALYDTKNLTLVEQLIAK
GIAFKYQKWNQVNELVDIDLVINKPKKQNSEQVNNEINKIIHRYKTKDNNKKIKPGYKKK
RKEEIAALKKQIRRDHIKASIKKIKKEKAKERGIKLFDKE
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaataattttgataagttaggtttaaaacgatttctaaatttaggtttggaacaatta
aattttacagaaccaacaatggtacaagaaaaagttattccattgttattaaaacatcaa
aatgttatttgcaaagctcatactggaactggcaaaacttttgcattttgtttaccgatt
ttaaataatttagattatgaacaatcaagcattcagtcaattattgtgacaccaacccgt
gagttagcaaaacaaatttatgataacattcgtttttttaaaacatttcaaccagcatta
caagttaattgctttgttgggggagaagacattaaacggcaaatagaacagttagaacga
aatcaaccgcatatcatggttgtaacaccaacacggttaaaggatttgtttgatcaacaa
agtttaaaattaggaaagttaacaacatttattattgatgaatgtgatatgatttttgat
ttaggttttattgaaaatgttgattatcttttaagtaaagttaatcctaacgttcaagtt
tctgtattttcagcaacaattccagaagtgttaaaaccatttttaataaaatatttaaaa
aatccgcattatttggatttaaatgctaatcaaataactaaccaaaatattacgcatatt
ttaattccaactaagcatcaagaacgaagtactattttattaaaacttttaaaaacattt
gatccttatttgtgtttgatttttgttaataagaaagaagaaattaataaatattatgat
ttattattagaacataattattcagtaacccaattgcatgctggtttagaaccacggtta
cgaactcaagttgtaaaacgaattcgtaatttagaatataagtatgttattgctagtgat
attgcggcgcgaggaattgattttgttggagtaagtcatattatttcaattgatttacca
aatgacttagaatattatattcatcgtagtgggcgaactggacgggcaaattatactggt
tatagttatgctttgtatgatacaaaaaatttaacgctggttgaacaattaattgcaaag
ggaattgcttttaagtatcaaaaatgaaatcaggtgaatgaattagttgatattgattta
gtgattaataaaccaaaaaaacaaaattcagaacaagttaataatgaaattaataaaatt
attcatcgttataaaacaaaagataataataaaaaaattaaacctggttataaaaagaaa
cgaaaagaagaaatcgcggcgttaaagaaacaaattcgtcgtgatcatataaaagcatca
attaagaaaattaaaaaagaaaaagcaaaagaacgggggattaaattatttgataaagaa
taa
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