Spiroplasma sp. TU-14: STU14_v1c06480
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Entry
STU14_v1c06480 CDS
T06095
Symbol
deaD
Name
(GenBank) DEAD-box ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
spit
Spiroplasma sp. TU-14
Pathway
spit03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
STU14_v1c06480 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spit03019
]
STU14_v1c06480 (deaD)
03009 Ribosome biogenesis [BR:
spit03009
]
STU14_v1c06480 (deaD)
Enzymes [BR:
spit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
STU14_v1c06480 (deaD)
Messenger RNA biogenesis [BR:
spit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
STU14_v1c06480 (deaD)
Ribosome biogenesis [BR:
spit03009
]
Prokaryotic type
rRNA helicases
STU14_v1c06480 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
P-loop_SecA
AAA_22
baeRF_family2
Motif
Other DBs
NCBI-ProteinID:
AOX43985
LinkDB
All DBs
Position
complement(739325..740650)
Genome browser
AA seq
441 aa
AA seq
DB search
MNFNTLNLSPALERMITKMGYTNLTEIQEKAIPVALNNQDIIGKSHTGTGKTAAFILPIL
QRLDPQLKRPQAIILCPTRELAMQVIDQVRKFATYLEGVNATLLCGGSHLQRQIYSLRKS
NIVVGTPGRIADHINRNTLRLNTIKTIVLDEADEMLKMGFKTELDKVFENAPKKYQTLLF
SATMPKQVLEIANKYQNNPVEIVVTRNATEQNNITQYYVDAISYRKEDVLIALYKNLQPK
RSIIFSNTKAFTDKIAKMLATIGVTSCVINGDKRQRERLQAMRSFREGKATVLVATDVAA
RGIDIDQIDYVFNYDIPTERESYIHRIGRTARAGATGVAITIVSNRNDLNEIKHLAQYQK
KKIELFDITNYNLKEKIKESKNFSGNYKQLDSKQNKNSKYSNSHGSSKTDRGNFNKSNAP
QFGKNNKRKNKKFAKNKLKFN
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaattttaatacactaaatttatccccagccttagaacgaatgattactaagatggga
tatactaatctaactgaaattcaagaaaaagctattccagttgcattaaataatcaagac
attattggcaaaagtcatactggaactggtaaaacagccgcttttattttaccaatttta
caaaggttagatccacaattaaaacgaccacaagctattattttatgcccaacaagagaa
ctggcaatgcaggtaattgatcaagttcgaaaatttgcgacttatttagaaggagtaaac
gcaacattattatgtggtggttctcatttacaacgccaaatttactcattgcgaaaaagt
aacattgttgttggaacaccagggcgaattgctgatcatatcaatcgtaataccttgcgg
ttaaacacaattaaaacaattgttttagatgaagcagatgaaatgttaaaaatgggtttt
aaaaccgaacttgataaggtgtttgaaaatgcccccaaaaaatatcagacattattattt
tctgcaacaatgccaaaacaagtcttggaaattgctaataagtatcaaaataatcctgtt
gaaattgttgtaacaagaaatgctacagaacaaaacaatattactcagtattatgttgat
gcaatttcttatcgtaaagaagatgttttaattgctctatataaaaatttacaaccaaaa
cgaagtattattttttctaatacaaaagcttttactgataaaattgctaaaatgcttgca
acaattggggttactagttgtgttattaatggggataaacggcaacgtgaacgattacaa
gcaatgcgatcatttcgtgaaggaaaagcaacggtattagttgcaactgatgttgctgca
cgaggaattgatattgatcagattgattatgtttttaattatgatattccaacggaacga
gaaagttatattcaccgcattggtagaacagcacgagcaggtgctacgggagttgcaata
acgattgtttcgaatcgtaatgatttaaatgaaattaaacatttggcacaatatcaaaag
aaaaaaattgaattatttgatattactaattataatttaaaagaaaaaataaaagaatct
aagaattttagtggaaattacaaacagttagattctaaacaaaataagaatagtaaatat
agtaattctcatggttcatccaaaactgatcgtggcaattttaataagagtaatgcccca
caatttggaaaaaataacaaaagaaaaaataaaaaatttgcaaaaaacaaattaaaattt
aattaa
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