Spiroplasma sp. TU-14: STU14_v1c10250
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Entry
STU14_v1c10250 CDS
T06095
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
spit
Spiroplasma sp. TU-14
Pathway
spit03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
STU14_v1c10250 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spit03400
]
STU14_v1c10250 (mutM)
Enzymes [BR:
spit01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
STU14_v1c10250 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
STU14_v1c10250 (mutM)
DNA repair and recombination proteins [BR:
spit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
STU14_v1c10250 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
zf-FPG_IleRS
Zn_ribbon_SprT
Stealth_CR2
Ribosomal_S13
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
AOX44361
LinkDB
All DBs
Position
complement(1179160..1179993)
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AA seq
277 aa
AA seq
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MPELPEVETVRRILTKYVVGKTITDCQIFWNKIIKAPIDSKVFIKEVVGQKINQIDRMGK
HLLFILDDYVLISHLRMEGKYFFTKKDEPGEWQHIMVLFELDHQFQLRYHDTRKFGTMHL
YDKSDYLQQAPLNKLGYEPFDERITVSYLKNAWQSKSQPIKTTLLEQNVIVGIGNIYANE
ILFASKIHPGEKTKNLADQDYQNIIDNTKIVLQKAINEGGTTIATYHPEPGMDGKFFQQL
KVHGRNKLECVNCKNQVDKIFVNGRGTYYCNYCQKLK
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattaccagaagtcgaaacagttcgccgaattttaacaaaatatgtcgtgggg
aaaacaattactgattgtcaaattttttgaaataaaataataaaagctccaattgattca
aaagtttttattaaagaagttgttggccaaaagattaatcaaattgatcgaatgggaaaa
catttgctttttattctagatgattatgttttaattagtcatttaagaatggaaggaaag
tatttttttacaaaaaaagatgaaccaggtgaatgacaacatattatggttttatttgaa
cttgaccatcaatttcaattacgttaccatgatacaagaaaatttgggacaatgcattta
tatgataagagtgattatttgcaacaagcaccattaaataaattggggtatgaaccattt
gatgaacgaattactgtttcatatttaaaaaatgcttggcaaagcaaatcacaaccaatt
aagacaacattattagaacaaaatgttattgttggaattggtaatatttatgcaaatgaa
attctatttgcatcaaaaattcaccctggtgaaaaaaccaaaaacttagctgatcaagat
tatcaaaatattattgataatacaaaaattgtgcttcagaaagcaattaatgaaggtgga
acaacaattgctacttatcatcccgaaccaggaatggatgggaaattttttcagcagtta
aaagtacatggtcgaaataaattggagtgtgttaattgtaaaaatcaagttgataaaatt
tttgttaatggtcgaggaacttactattgtaattattgtcagaaattaaaataa
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