Spiribacter curvatus: SPICUR_09405
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Entry
SPICUR_09405 CDS
T02888
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
spiu
Spiribacter curvatus
Pathway
spiu03420
Nucleotide excision repair
spiu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spiu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SPICUR_09405
03430 Mismatch repair
SPICUR_09405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spiu03400
]
SPICUR_09405
Enzymes [BR:
spiu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SPICUR_09405
DNA repair and recombination proteins [BR:
spiu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SPICUR_09405
MMR (mismatch excision repair)
Other MMR factors
SPICUR_09405
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
AGY92800
UniProt:
U5T5Q9
LinkDB
All DBs
Position
complement(1896852..1899026)
Genome browser
AA seq
724 aa
AA seq
DB search
MDVSDLIDPLNPAQREAVSAPLGHALVLAGAGSGKTRVLTHRAAWLVRVEGATPWNLLAV
TFTNKAAAEMRGRIEERLGISRSGLWVGTFHGLSHRLLRLHWQEAGLPQGFQILDSEDQR
RLVKRIMRDLELDENRWPVRQLQGFINARKDAGERAEDLDSADPYTGQMARVYAAYEQAC
RSAGVVDFAELMLRTVEMLQNHLELLGHYRRRFRHVLVDEFQDTNGIQYEWLKLLAGPES
DVFIVGDDDQSIYGWRGARVENLERFRKDYSNTRVLRLEQNYRSTRTILDAANTLIARNS
DRLGKKLWTEGEAGEPIALYAAFNEQDEARFVVERLMAMVDEQGLARSDIAILYRSNAQS
RTFEEALMARRVPYRVYGGLRFFERAEIKDALAYLRLMANRDDSAALERIINTPTRGIGN
RTVETLRIAARDQGISLWAAARGLVTHGGGLPARAGNALRAFLDLIDGLAADTAGASLPE
CMETMLTRTGLRAHLGKDGSERAQDKLENLDELITAAGNFEQDNTAEAEMEPLTAFLAHA
ALEAGEGQAGAWEDCVQLMTLHSAKGLEFPVVFLAGLEEGLFPHRMSVEEPGRLEEERRL
AYVGITRARQQLLISYAERRRLHGRDDFAIASRFIRELPPALVDEVRARFSVTGPTAAGT
GPGEGAATATEAEFGLGERVQHSRFGEGIVLDCEGNGPNARIQVNFNSAGTKWLVAAYAN
LERI
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggatgtatccgatctgatcgacccgctcaaccccgcccagcgtgaagccgtcagtgcg
ccgctgggccacgccctggtccttgccggcgccggcagtggcaagacccgcgtcctcacc
caccgggccgcctggctggtccgggtggaaggggccacgccctggaatctgctggcggtc
accttcaccaacaaggccgccgccgagatgcgcgggcgcatcgaggagcgccttggtatc
agccgctcggggctctgggtcggcacgttccacggcctcagccaccggctgctgcgcctg
cactggcaggaggcggggctgccgcagggttttcagatcctcgacagtgaggatcaacgc
cggctcgtgaagcggatcatgcgcgatctggagctcgacgagaaccgctggccggtgcgt
cagctgcagggcttcatcaacgcccgaaaggacgccggcgagcgcgccgaagacctcgac
agcgccgacccctacaccgggcagatggcgcgggtctacgccgcctacgagcaggcctgc
cgcagtgccggcgtcgtggatttcgccgagctgatgctgcgcaccgtggagatgctccag
aaccacctcgagctgttgggccactaccggcgtcgcttccgccatgtgctggtggatgag
ttccaggacaccaacggcatccagtacgagtggctcaagctcctggccgggccggaatcg
gatgtgttcatcgtcggcgatgacgatcaatcgatctatggctggcgcggcgcccgggtg
gagaacctggagcgctttcgcaaggactactccaacacccgcgtgctgcggctcgagcag
aactaccgctcgacccgcaccatccttgacgccgcgaacacgctgatcgcccgcaacagc
gaccgtctgggcaaaaagctctggaccgagggcgaggccggtgagcccatcgccctctat
gccgcgttcaacgagcaggacgaggcgcggttcgtggtggagcggctgatggccatggtc
gacgaacagggcctggcgcgtagtgatatcgccatcctgtatcgctccaacgcccagtca
cggaccttcgaggaggcgctgatggcccggcgcgttccgtatcgggtctatgggggcctg
cgctttttcgagcgcgccgagatcaaggacgccctcgcctacctgcggctgatggccaac
cgcgacgacagcgccgcgctcgagcggatcatcaataccccgacccgggggatcggcaat
cgcaccgttgagaccctgcggatcgccgcccgcgatcaggggatcagcctctgggccgcg
gcacgtggactggtcactcatggcggcgggctgcccgcccgtgccggcaatgccctgcgg
gcgtttctggatctgatcgatgggctggccgcggacaccgccggggcatccctgcccgag
tgtatggagacgatgctgacccggaccgggttgcgcgcgcacctgggcaaggacggatcg
gagcgggctcaggacaagcttgaaaacctcgacgagctgatcaccgcggccggcaacttc
gaacaggacaacaccgccgaggcggagatggagccgctcaccgcgttccttgcccatgcc
gcgctggaggcgggtgagggacaggccggcgcctgggaggactgcgtgcagctgatgacc
ctgcactccgccaaggggcttgagttcccggtggtgttcctggccgggcttgaggaggga
ctgttcccgcatcgcatgtccgtcgaggagccgggccggctcgaggaggagcgccgcctc
gcctacgtgggcatcacccgggcccggcagcagcttttgatcagctacgccgagcgccgc
cgcctgcatgggcgggacgacttcgccatcgcctcacgctttatccgcgagctgccgccg
gcgctggtggatgaggtgcgggcgcggttctcggtgaccggcccgaccgccgccgggacc
ggtccgggggagggcgccgccaccgccaccgaggccgagttcggcctcggcgagcgcgtc
cagcacagtcgcttcggcgaggggatcgtgctcgactgtgagggtaatggccccaacgcc
cgcatccaggtcaacttcaacagcgcgggcaccaagtggctggtcgccgcctacgccaat
ctggaacggatctag
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