Spiribacter sp. 2438: GJ672_00130
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Entry
GJ672_00130 CDS
T06294
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
spiz
Spiribacter sp. 2438
Pathway
spiz00300
Lysine biosynthesis
spiz00470
D-Amino acid metabolism
spiz01100
Metabolic pathways
spiz01110
Biosynthesis of secondary metabolites
spiz01120
Microbial metabolism in diverse environments
spiz01230
Biosynthesis of amino acids
Module
spiz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
spiz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GJ672_00130 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GJ672_00130 (lysA)
Enzymes [BR:
spiz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
GJ672_00130 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Erythro-docking
Motif
Other DBs
NCBI-ProteinID:
QGM20834
UniProt:
A0A6B8JRN4
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Position
complement(27106..28350)
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AA seq
414 aa
AA seq
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MSITRQNGHLQVENHSVESLAEQFGTPLYVYSRQSIETAFRAYDAAFPDRDHLVCYAVKA
NGSLAILQLLARLGSGFDIVSVGELERVLQAGGDPQRVVFSGVGKRVDEMERALDVGILA
FNVESEAELERLDAVACARGVQAPVSLRVNPDVDARTHPYISTGLRDNKFGIDIHRAEAV
YARAASLPGIRITGLDFHIGSQLTELEPLADALSRSLALVDRLDERGIPIEHLDIGGGLG
IRYQDEHPPTPAELGESLAPLIGDRNLRLLMEPGRALVGEAGLLVTRVEYLKPGHRDFAI
VDAAMTDLLRPALYDAWQRIEPVASPDTEPRVYDVVGPVCETADVLGRERALALQPDSLL
AIYGAGAYGFVMASQYNARPRPAEVLVDGDQAHLIRERETIAELWRGEHLLDRP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
gtgagcatcacccggcaaaacggccacctgcaggtcgaaaatcattcggtggaaagcctg
gccgagcagttcggcacgccgctgtacgtgtactcgcggcagtccatcgaaaccgccttc
agggcctatgacgccgccttcccggaccgggatcatctggtctgctacgccgtcaaggcc
aatggcagcctggcgattctgcaactgctggcacggctgggcagcggcttcgacatcgtt
tcggtaggcgagctggaacgggtccttcaggccggcggtgatccacagcgggtggtcttc
tccggcgtgggcaagcgggtcgatgaaatggagcgggcgctggacgtcggcattctggcg
ttcaacgtcgagtccgaagcggagctggagcggcttgacgccgtggcctgcgcccgcggc
gtgcaggcgccggtgtcgctgcgagtgaaccccgacgtggacgcccgcacccacccctat
atttccaccggcctgcgggacaacaagttcggcatcgacatccaccgggccgaggcggtg
tacgcgcgggccgccagcctgccgggcatccggatcaccggactggactttcacatcggc
tctcagctcaccgagctggagcctctggcggacgcgctttcccgcagcctcgcactggtg
gaccggctggacgagcgcggcataccgatcgaacatctggacatcggcggggggctgggc
attcgttaccaggacgaacacccgcccacgccggcggaactgggcgagtcactggcgccg
ctgatcggggaccgcaacttgcgcctgctcatggagccggggcgagccctggtgggcgag
gccggcctgctggtgacccgggtggaatacctcaagcccgggcaccgggactttgccatt
gtcgacgccgccatgaccgacctgctgcgaccggcgctctacgacgcctggcagcgcatc
gaaccggtggcgtcgccggacaccgaaccccgggtatacgacgtggtggggccggtgtgc
gagaccgccgatgtgctggggcgggagcgtgccctggcactccagccggacagcctgctg
gccatttacggcgccggcgcctacggcttcgtgatggcctcccagtacaacgcccggcca
cggcccgccgaggtgctggtggatggcgatcaggcgcatctgatccgcgagcgggagacc
atcgccgaactctggcgcggcgaacatcttctggaccggccatga
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