Spiribacter sp. 2438: GJ672_00325
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Entry
GJ672_00325 CDS
T06294
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
spiz
Spiribacter sp. 2438
Brite
KEGG Orthology (KO) [BR:
spiz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spiz03032
]
GJ672_00325
03400 DNA repair and recombination proteins [BR:
spiz03400
]
GJ672_00325
Enzymes [BR:
spiz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GJ672_00325
DNA replication proteins [BR:
spiz03032
]
Prokaryotic type
DNA Topoisomerases
GJ672_00325
DNA repair and recombination proteins [BR:
spiz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GJ672_00325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QGM20871
UniProt:
A0A6B8JMJ9
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Position
complement(71646..74057)
Genome browser
AA seq
803 aa
AA seq
DB search
MSTKLVIVESPAKARTINKYLGNDYEVMASYGHVRDLVAREGAVDPEQGFEMHYTVVERN
AKQVDAIAKATRKAEAVYLATDPDREGEAISWHLHELLRERGVLDGKPVHRVVFYEITKG
AIQEAIEHPRGLSDDLVNAQQARRALDYLVGFNLSPLLWRKITSGLSAGRVQSPALRMIV
EREQEIEAFVPREYWSVEADLQREGHDFVGRLQQLDGGKVEQFTITDGETAETAGRRILA
AAGAASDTPLGEPLPESGRGELVVTRVEKKQRRRNPSAPFITSTLQQEASRKLRFSAQQT
MRIAQQLYEGVDTGSGTVGLITYMRTDSVNLSQEAIQSLRAVIEKRFGPEKLPKQAHQYR
TRAKNAQEAHEGIRPTDAARAPEQLKGYLSDDQYRLYDLIWKRTVACQMIHATIDTVSVD
LAAGEVANFRATGSTIRDPGFMAVYQDGGDDRAADGNERILPPLSEGDRIPLLALRPEQH
FTEPPPRYSEASLVRALEEYGIGRPSTYAAIISTLQTRNYVTLENRRFQPTDTGRVVARF
LTEHFDRYVDYEFTAKLEDRLDAVSRGENDWVPVLEEFWKPFRERVEEKQQVSRSDVMKA
RELGTDPKSGRPVSARLGRYGPFAQIGTRDDEEKPKFASLRPGQSIETITLEEALALFTL
PRDLGTTPDGLPLSVNIGRFGPYVRFGDQFASLKKDDDPYSIDRETALQRVEEKKENIAK
RTIQSFDDGALTVMKGRFGPYVTDGRKRARVPKDQDAESLTKAQCQTLVDEAPEPKGRGG
TKRKSTSGRKTASKGGGKRSSGS
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccaaactcgtcatcgtggagtcgccggccaaggcgcgcaccatcaacaaatac
ctgggcaatgactacgaggtcatggcgtcgtacggccatgtgcgtgatttggtggcccgc
gaaggtgcagtggaccccgagcagggcttcgagatgcactacacggtggtggagcgcaac
gccaaacaggtggatgccatcgccaaggccacccgcaaggccgaagcggtctatctggcc
actgaccctgaccgcgagggcgaggccatttcctggcatttgcacgagcttctgcgggag
cggggcgtgctggacggcaagcccgtgcaccgagtggtgttctatgaaatcaccaagggc
gccatccaggaagccattgaacacccccgaggactctccgatgacctggtgaacgcccag
caggcgcgccgggcgctggattacctggtgggcttcaacctctcgccactgctctggcgc
aagatcaccagcggcctctccgccggtcgggttcagtccccggccctgcggatgattgtc
gagcgtgaacaggaaatcgaagccttcgtgccccgggaatactggagcgtcgaagccgac
ctgcaacgtgagggccatgattttgttggccgcctgcagcagctggacggcggcaaggtg
gagcagttcaccatcaccgatggcgaaaccgccgagaccgctggccggcgcatcctggcc
gccgccggagccgccagcgatacgccactgggcgaacccctgccggaatccggccgcggc
gaactggtggtgacccgggtcgagaaaaaacagcggcggcggaatccttccgcgcccttc
attacctcgacgctgcagcaggaggcctcgcggaagctgcgtttctctgcccagcagacc
atgcgcatcgcccagcaactctatgaaggcgttgacacgggcagtggcaccgtcggcctg
atcacctacatgcggaccgactcggtgaacctctcccaggaagcgatccagtcattacgg
gccgtcatcgaaaagcgctttgggcccgagaaactgcccaagcaggcgcatcaataccgc
acccgggccaaaaacgcccaggaagcccatgagggcatccggcccaccgacgccgcgcgg
gcacccgagcagctgaaaggttacctgagcgacgaccagtaccggctttacgacctgatc
tggaagcgcacggtggcctgccagatgatccatgccaccatcgacaccgtgtcggtggac
ctcgccgccggcgaggtggccaatttccgggccaccggctccaccattcgcgaccccggg
ttcatggcggtctaccaggacggtggtgacgaccgggcggccgatggcaacgagcgcatc
ctgccgccgttgagcgagggcgaccgcattccgctgctggcactgcgccccgagcagcac
tttaccgagccgcctccccgctactccgaggcgagtctggtgcgagcgttagaggagtat
ggcatcggacggccctccacctatgccgccattatctcgacgctgcagacgcgcaattac
gtcaccctggagaaccgccggttccagcccaccgacaccggtcgggtggtggcccggttc
ctgacggaacattttgatcggtatgtggattacgaattcacggccaagctcgaagaccgc
cttgatgccgtctcccggggcgagaacgattgggtgccggtgctggaggagttctggaag
ccctttcgggagcgggtggaagaaaaacagcaggtctcccgcagcgatgtgatgaaagcc
cgggagttgggcacggaccccaaatccggtcgtccggtcagcgctcgcctggggcgctac
gggccgttcgcgcagatcggcacccgcgacgacgaggaaaaaccgaaattcgcgagcctg
cggcccggccagagcatcgagaccatcaccctggaagaggccctggcgctgttcacgctg
ccccgggacctggggaccacgccggatggcctgccgctcagcgtcaacatcggccggttc
gggccctatgtgcgattcggcgatcagttcgcttccctgaaaaaagatgatgatccttat
tccatcgatcgggaaacggccctgcagcgggtggaagagaaaaaggaaaacatcgccaag
cgcaccattcagagctttgatgacggggcgcttacagtcatgaagggccgctttggccct
tacgtcaccgacggtcgaaaacgcgcacgggtgcccaaggatcaggatgccgagagcctg
acgaaagcgcagtgccagactctggtggacgaggcgcccgagcccaagggccggggcggc
accaagcgcaaaagcacctcgggtcgcaaaaccgccagcaagggcggcggcaagcgctcc
tccggcagctag
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