Spiribacter sp. 2438: GJ672_00865
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Entry
GJ672_00865 CDS
T06294
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K01420
CRP/FNR family transcriptional regulator, anaerobic regulatory protein
Organism
spiz
Spiribacter sp. 2438
Brite
KEGG Orthology (KO) [BR:
spiz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spiz03000
]
GJ672_00865
Transcription factors [BR:
spiz03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
GJ672_00865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Crp_2
cNMP_binding
Crp
MarR_2
HTH_6
MarR
DUF1670
HTH_IclR
HTH_24
MukF_M
ssDNA-exonuc_C
Motif
Other DBs
NCBI-ProteinID:
QGM22474
UniProt:
A0A6B8JWD8
LinkDB
All DBs
Position
complement(178678..179322)
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AA seq
214 aa
AA seq
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MIGLSEAGRAAVCQGAQAISLPSGTRVFGPGDRCNGLPLVIKGGVRVQMMGASGNEIVLY
RIQDGEMCPLSLACLLTAGSHQSEAIAEEETQVLVLPTGLTEKLMNEEPAFRQGVLESYG
QRLQSLMLTIEEVAFQRMDHRLAERLLQRQCDNCLAVTHQDLAVELGTAREVISRLLKEF
ERRGFVQLERGLIRIIDKGALRGLADAGGPCRSA
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgatcgggctgagtgaggcgggacgagcggcggtttgccagggagctcaggccatatcg
ctgccatcggggactcgcgtgttcgggcccggtgaccggtgcaacggactgcctctggtg
atcaaaggcggtgttcgcgttcagatgatgggcgcctcggggaacgaaatcgttctctat
cggatccaagatggcgagatgtgcccgctgtcgctggcttgcctgctcaccgcagggagc
catcagtccgaggccatcgccgaggaggagacgcaggttttggttctgccaaccggtctg
accgaaaaactgatgaacgaagagcccgcgttccgtcagggcgtgctcgaaagttacggt
cagcgccttcagtcgctgatgctgaccattgaagaagtggccttccagcgaatggaccac
cgactggcggagcggctcttgcagcgccagtgcgataattgcctggcggtcacccatcag
gatctggcggttgagctcggcaccgcccgcgaggtcatcagccgcctcctgaaagaattt
gagcgccgcggctttgttcaactggagcgcggtctcattcgcattatcgacaagggcgct
ttgcgaggcctggccgatgccggcggcccttgccgaagcgcctga
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