Spiribacter sp. 2438: GJ672_01100
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Entry
GJ672_01100 CDS
T06294
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
spiz
Spiribacter sp. 2438
Brite
KEGG Orthology (KO) [BR:
spiz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spiz03021
]
GJ672_01100 (rpoH)
Transcription machinery [BR:
spiz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GJ672_01100 (rpoH)
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
QGM21009
UniProt:
A0A6B8JNB6
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Position
complement(220387..221277)
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AA seq
296 aa
AA seq
DB search
MSSGTSLINVQYESLPLRAGSEDQYIRAVNAIPALSAEEEQELATRYHQSEDLDAARWLV
LAHLRFVVHVARGYSGYGLPLADLIQEGNVGLMKAVKRFDPEVGVRLVSFAVHWIRAEIH
EFILRNWRIVKVATTKAQRKLFFNLRNAKKRLGWLNREEVEAVAADLGVKPDHVLEMESR
LSGQDLGFDPGPEADDEDTPSWAPASYLQANRADPADEMESVDWENWREGRLQQALEGLD
PRSRDILTRRWLTEPKATLHALAEEHGVSAERIRQLEKNALRRLREGLADSRILEA
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccggaacgtcactgatcaatgttcaatacgaatcgttgccgctgcgcgccggc
agcgaggatcagtacattcgagcggtcaatgccattccggccctgagtgctgaggaagaa
caggaactggcgacgcgataccaccagagcgaggatctggacgccgcccggtggctggtg
ctggcgcatctgcggttcgtggttcacgtggcccggggctattccggttatggcctgccg
ctggctgatctgatccaggagggcaacgtcggcctgatgaaggccgtcaagcgcttcgac
cccgaggtgggcgtccggctggtgtcctttgccgtgcactggattcgcgccgagatccat
gaattcattctgcgcaactggcgaatcgttaaagtggcgaccaccaaggcgcagcgcaag
ctgttcttcaatctgcgcaatgccaaaaaacggctgggctggctcaaccgcgaggaagtc
gaagcggtggccgccgacctgggcgtcaaaccggaccatgttctcgaaatggagtcccgc
ctgtcaggacaggacctgggattcgatcccgggccggaggcggacgacgaggacactccc
agctgggcaccggccagctacctgcaggccaatcgcgccgacccggccgacgaaatggaa
tccgttgactgggaaaattggcgggaaggccggctacagcaggccctggaggggcttgac
ccccgcagtcgcgatattctcacgcggcggtggctgaccgagcccaaggccacattgcat
gccctcgccgaggaacatggcgtgtcggcggaacgaatccggcagctcgagaagaacgct
ctgcgccggctgcgcgaagggctggctgattcccgcatcctcgaagcctga
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