Spiribacter sp. 2438: GJ672_01250
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Entry
GJ672_01250 CDS
T06294
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
spiz
Spiribacter sp. 2438
Pathway
spiz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spiz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GJ672_01250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spiz03400
]
GJ672_01250
Enzymes [BR:
spiz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GJ672_01250
DNA repair and recombination proteins [BR:
spiz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GJ672_01250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
AAA_30
Zn_ribbon_6
T2SSE
nSTAND_NTPase5
nSTAND3
AAA_19
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QGM21036
LinkDB
All DBs
Position
complement(247641..249626)
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AA seq
661 aa
AA seq
DB search
MTETIPVAVPGPFTDPLDYLPPGTGTPPLPGTRVRVPLGRRQVVGIVTGPPRPATVAGTR
LKRIQDVLDASPLLGDSLRNLIHWAAGYYHHPIGECFATALPTRLRQGREAVVSGRRKAL
VAGNAEHPVPELNSEQRAASSAIAIQQGHAVILIEGVTGSGKTEVYLDAIHRALAVGLQV
LVIVPEIGLTPQLVQRFQQRLAGNMAVLHSGLSDSQRLNAWLAAANGEADVIIGTRSAIF
VPLARPGLIVVDEEHDPSLKQQEGFRYSARDLAVYRGHQLDLPVVLGSATPSLESLANAE
SGRYQTVRLTQRAGGAAPPRLRLMDMRGQPTIEGLSEPLIRTVREHLEADGQVLLFLNRR
GYAPTLICHECGWIAECDRCDARYTYHRGRSRLHCHHCDRETGVPRACPECGSVDLRPLG
LGTERVESTLQTLLPDTPLIRIDRDSTRRRGEFERQMASALSGESRLLLGTQMLAKGHHL
PAVTLVAVIDADQGLFGADFRAPERLAQLVIQVAGRAGRAERPGEVVIQTHQPEHPLLQT
LIHGGYPAFAEVALAERQAAGLPPARSMALLRAEAPGKAAPQAFLQAALAVMPAQTSVEA
LGPYPAPMERRAGRYRAQLMLQADHRPALQRLLSCWLPAIGALPEARRARWSVDVDPAET
L
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagaccattcccgtggcggtgccaggccccttcaccgatccccttgactatctg
ccgcccgggacgggcacgccgccattaccgggcacccgggtgcgagtccccctgggtcgt
cgccaggtggtgggcattgtcacggggcctccccgcccggccaccgtggccggtacccgg
ctgaaacggatccaggacgtactggatgcctcgccgctgctgggggattccctccggaat
ctgattcactgggccgccgggtactaccaccaccccattggcgaatgcttcgccacggcg
ctgcccacccgcctgcgccagggtcgggaggccgtggtcagcggccgccgcaaggcgctg
gtggcgggcaatgccgaacaccccgtacccgaactgaattcagagcagcgcgcggcctcc
tcggccattgccattcaacaaggccacgcggtgattctgattgagggcgtcaccggcagc
ggcaagaccgaagtctatctcgacgccatccaccgggctctggcagtgggtcttcaggtt
ctggtcatcgtgccggagatcggactcaccccccagctggtgcagcgctttcagcagcga
ctggccggcaacatggcggtgttgcactccggcctgtcggacagccagcggctcaacgcc
tggctggcggcggccaatggcgaagcggacgtgattatcggtacgcgctcggcgattttc
gtgcctctggcgcggccgggcctgattgtggtggatgaggaacacgatccctccctcaag
caacaggaaggatttcggtattcggcccgggacctggcggtctaccggggccaccagctg
gatctgccggtggtgctgggctccgccactccctcgctggaaagtctggccaacgccgag
agcggacgctaccagaccgtgcgcctgacccagcgcgccggcggtgcagctccacctcgg
ctgaggctgatggacatgcggggccaacccaccatcgaggggctgtccgagccgttaatc
cggaccgtgcgcgaacaccttgaggcggatggtcaggtgctgctgttccttaaccgtcga
ggctacgcccccacgctgatctgtcacgaatgcggctggattgccgagtgcgatcggtgt
gatgcccgctacacctaccatcgcgggcgttcgcgcctgcactgccatcactgtgaccgc
gaaaccggggttccccgagcctgccccgagtgtggcagtgtggatctgcgacccctggga
cttggcaccgagcgggtcgagtcgacgctgcagactctcctgccggatactcccctgatt
cgtatcgatcgggacagcacccgccggcgcggcgaatttgagcggcaaatggcctcggcg
ctgagcggcgagtcccggctgcttctgggcacccagatgctcgccaaaggacaccatcta
ccggcggtgacactggtggcggtgatcgatgcggatcaggggctttttggcgccgatttc
cgggccccggagcggcttgcccagttggtgattcaggtggccgggcgggcagggcgggcc
gagcgtcccggcgaggtggtcattcagacgcaccaacccgagcacccactgcttcagacc
ctgatccatggcggctaccccgccttcgccgaagtggcgctggcggagcgccaggccgcc
ggattgccgccggcacggtcgatggcgctattgcgcgccgaggcccccggcaaggccgct
ccgcaagcgtttctgcaggcagccctggcggtcatgccggcacagacctcggtggaggca
ctcggaccctatcccgcccccatggagcgtcgggcgggccggtatcgcgcccagttgatg
ctgcaggcggatcaccgccccgccctccagcgcctgctgtcctgctggttgccggccatc
ggtgcgttgccggaagcgcgccgggcccgatggtccgtggatgtggaccccgccgaaacc
ctctga
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