Spiribacter sp. 2438: GJ672_01705
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Entry
GJ672_01705 CDS
T06294
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
spiz
Spiribacter sp. 2438
Brite
KEGG Orthology (KO) [BR:
spiz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spiz03400
]
GJ672_01705
Enzymes [BR:
spiz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
GJ672_01705
DNA repair and recombination proteins [BR:
spiz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
GJ672_01705
Prokaryotic type
GJ672_01705
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QGM22489
UniProt:
A0A6B8JSK3
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All DBs
Position
complement(339697..341190)
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AA seq
497 aa
AA seq
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MSAAICWFRRDLRLTDNPALAAAARDGRAVIPVYIHAPAEAEGWAPGGASNWWLHHSLEA
LTAALAARGLPLVIRAGDSLLVLQALVEATGADAVHWNRLYDPAFIRRDMAIKQALRDQG
VAAHSHNASLLNEPWTVQTGTGSDYKAFTPFWRACRRQGEPPEPEPAPTLPAASAGIRAL
PGASGLDEAGHEPLQALQLLPGVDWAASLRDRWIPGEAGAGEQLETFLNNDGLAHYATRR
DQPAVAGTSRLSPHLHFGEIGPRQVWQAVQHRLAGDSDADSREGADRFLAEIGWREFAHH
VLYHHPDFPEQPLNPRFADFPWQEDPDGALLTAWQRGETGIPLVDAGMRELYATGWMHNR
VRMVVGSFLVKNLRLPWQAGEAWFWDTLVDADLASNSLGWQWVAGSGADAAPYFRIFNPV
RQSERFDPRGDYIARWVPTLAALPPKHRHAPWEAPESVLADHGVTLGQHYPHPIVDLKAS
RQAALAAFEQIKKPAES
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcggcgatctgctggttccgacgggacctgcgcctcaccgacaatccggccctg
gcggccgcggcccgggacggtcgggccgtgatcccggtgtacatccacgcgccggcggaa
gccgagggatgggcacccggtggggcgtccaactggtggctgcatcacagcctcgaggcg
ctgaccgccgccctggccgcccggggcctgcccctggtgatccgcgcgggtgacagcctg
ttagtgctacaggcgctggtggaagccaccggtgccgacgccgtccactggaaccggctt
tacgatccggcgttcattcgccgggacatggccatcaagcaggcgctccgcgaccagggc
gtggccgcccacagtcacaacgcctcactgctgaacgagccctggaccgtgcagaccggc
acgggcagcgattacaaggcgttcacgcccttctggcgggcctgccgccgccagggggag
ccgcccgagccggaaccggcgccgaccctgcccgccgcctccgcaggcattcgggcactg
cccggcgccagcggcctcgacgaggccggccatgaaccgctgcaggccctgcaactgctg
cccggcgtggactgggcggccagcctgcgggatcgatggatccccggcgaggcgggtgcc
ggcgagcagctggagaccttcctgaacaacgacggtctggcccactacgccacccggcgg
gaccagccggcggtggccggcacctcccggctgtctcctcacctccacttcggggaaatc
gggccacgccaggtctggcaggcggtacaacaccggctcgccggggacagtgatgccgac
agccgggaaggcgccgaccggtttctggccgaaatcggctggcgggaatttgcccatcat
gtgctctaccaccatccggatttcccggagcaacccctgaacccccggttcgcggatttt
ccctggcaggaggatcccgacggggcgctgctcaccgcctggcagcggggtgaaaccggc
attcccctggtggatgccggcatgcgcgagctgtatgccaccggctggatgcacaaccgg
gtgcgcatggtggtgggctcgtttctggtcaagaacctgcgattgccctggcaggccggc
gaagcgtggttctgggacacgctggtggatgccgatctggccagcaacagcctgggctgg
caatgggtggcgggcagtggcgccgacgccgccccctatttccggattttcaacccggtg
cgccagagcgagcgcttcgacccccggggcgactacattgcccgctgggtgccgacgctg
gccgccctgccgccgaaacatcgccatgccccctgggaggcaccggagtcggtgctggcc
gaccacggcgtgacgctgggtcagcattacccccatcccatcgtcgacctcaaggccagc
cgccaggcggcgctggccgcctttgagcagatcaagaaaccggcggagtcctga
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