Spiribacter sp. 2438: GJ672_01870
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Entry
GJ672_01870 CDS
T06294
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
spiz
Spiribacter sp. 2438
Brite
KEGG Orthology (KO) [BR:
spiz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spiz03400
]
GJ672_01870
Enzymes [BR:
spiz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
GJ672_01870
DNA repair and recombination proteins [BR:
spiz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
GJ672_01870
Prokaryotic type
GJ672_01870
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QGM21146
UniProt:
A0A6B8JQY9
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Position
370444..371994
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AA seq
516 aa
AA seq
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MNPQLVWFKRDLRVADHAPLARAAAAGPVLCVYVIEPAYWQLPDTAARHWGFIRESLQSL
AVDLQALGLRLRVVEGELPAVFQHLHAWAGFDTIHAHQETGNHWTYQRDRRVAAWCRQAG
VRFEETPAFGVVRPLANRDQWAGHWERRMKAAPVPRPTGARAAEPATPCPLPQRDPDQLP
EHLGHDRRPCPGRQPGGRPEGEALLASFLAERGETYRQGMSSPASARRVCSRLSAHIAYG
TLSLREIVQTHRRRWAAVRAEAPRSRWARSLKSFESRLHWHCHFMQKLEDEQALEWRNMH
RGYDGLRDEDQVDPERLAAWVEGRTGIPFVDACMRQLHHEGWINFRMRAMLVAVSSYHLW
MHWREPAQQLARLFTDYEPGIHYCQFQMQSGTTGINTLRIYNPVKQSRDQDPRGDYIRRW
VPELAALPADWIHEPWRLTGSLQRRYGVRLERDYPAPVVDHEQAARAARARIKAHRASRD
LSGESARVRQRHASRSPSPTRPRRRRTDPRQGSLDL
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccacagctggtctggttcaagcgggatctgcgggtggcggatcacgcgccactg
gcccgggccgcggccgccgggccggtgttgtgtgtgtatgtcatcgagcccgcctactgg
cagctgccggacaccgcggcccgtcactggggattcattcgcgagagcctgcagagcctg
gcggttgacctgcaggcgctggggctgcgcctgcgggtggtggagggcgaactgccggcg
gtgttccagcacctgcatgcctgggcgggcttcgacaccattcacgcccaccaggaaacc
ggcaaccactggacctaccagcgggaccgccgggtggccgcctggtgtcgtcaggccggc
gtgcggttcgaggaaacccccgccttcggggtggtgcggcccctggccaatcgggatcag
tgggccggccactgggagcgccgcatgaaagccgcgccggtgccccggcccacgggggca
cgcgccgccgagccggcgaccccctgcccgctgccccagcgggacccggatcagctgccc
gagcacctggggcatgaccggcgcccctgccccgggcgccagcccggcggccggcccgag
ggggaggccctgctggcgagttttctggccgagcggggcgagacctatcgccaaggcatg
tcgagccccgcctccgcccgccgggtgtgctcacggctgtccgcccacattgcctacggc
accctgtcgctgcgggaaatcgttcagacccaccggcggcgctgggcggcggtgcgggcc
gaggccccccggtcgcgctgggcccgttccctgaaatccttcgagtcgcggctccactgg
cattgtcatttcatgcagaaactcgaggacgagcaggcgctggagtggcgcaacatgcac
cgcggctatgacggcctgcgggatgaggatcaggtggacccggagcgactggcggcctgg
gtggagggtcgcaccggcattccctttgtggacgcctgcatgcgccagctccaccacgag
ggctggatcaactttcggatgcgcgccatgctggtggcggtgtccagctatcacctgtgg
atgcactggcgggagcccgcccagcagctggcgcggctgttcaccgactacgagccgggc
attcattactgtcagttccagatgcagtccggcaccaccggcatcaacaccctgcgcatc
tacaacccggtgaagcagtcccgggatcaggatccccggggggactacatccgtcgctgg
gtcccggagctggcggcgctgcccgccgactggatccatgagccctggcgtctgaccggg
tcgctgcagcggcgctacggggtccggctggagcgggattatccggcgccggtggtggat
cacgaacaggccgcccgggctgcccgggcccggatcaaggcccatcgggccagtcgggat
ctgagtggggagtcggcgcgggtgcgccagcgccacgccagtcgctcacccagcccgacg
cggccgcgtcggcgtcgcaccgatccgcgccagggcagtctcgatctctag
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