Spiribacter sp. 2438: GJ672_02825
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Entry
GJ672_02825 CDS
T06294
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
spiz
Spiribacter sp. 2438
Brite
KEGG Orthology (KO) [BR:
spiz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spiz03032
]
GJ672_02825
03036 Chromosome and associated proteins [BR:
spiz03036
]
GJ672_02825
03400 DNA repair and recombination proteins [BR:
spiz03400
]
GJ672_02825
DNA replication proteins [BR:
spiz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GJ672_02825
Chromosome and associated proteins [BR:
spiz03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
GJ672_02825
DNA repair and recombination proteins [BR:
spiz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
GJ672_02825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-DNA_bdg
HU-CCDC81_euk_1
DUF2267
Chalcone_3
Motif
Other DBs
NCBI-ProteinID:
QGM21306
UniProt:
A0A6B8JRD9
LinkDB
All DBs
Position
557624..557896
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AA seq
90 aa
AA seq
DB search
MNKSELIDAVAESAGLSKADATKAVDAFSQTVTDALKKGDQVTLVGFGTFTVRERAARTG
RNPRTGASINIAASKVPGFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatccgaactgattgatgccgttgccgagtcggcgggcctttccaaggcagat
gcgacgaaagccgtggacgctttctcgcagactgtcaccgatgcgctcaaaaagggcgat
caggttacgctggtgggctttggtacttttacggttcgtgagcgcgccgctcgcaccggc
cgcaaccctcgcaccggggcttccatcaacatcgctgcatccaaagtgccgggcttcaag
gctggtaaggcgctcaaggatgcagtaaactaa
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