Spiribacter sp. 2438: GJ672_04505
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Entry
GJ672_04505 CDS
T06294
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
spiz
Spiribacter sp. 2438
Pathway
spiz00541
Biosynthesis of various nucleotide sugars
spiz01100
Metabolic pathways
spiz01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
spiz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
GJ672_04505 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
spiz01005
]
GJ672_04505 (kdsB)
Enzymes [BR:
spiz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
GJ672_04505 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
spiz01005
]
Lipid A
GJ672_04505 (kdsB)
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GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
IspD
DUF2064
Motif
Other DBs
NCBI-ProteinID:
QGM21603
UniProt:
A0A6B8JPQ5
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Position
complement(889217..889972)
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AA seq
251 aa
AA seq
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MSTEFVVVIPARYGSTRLPGKPLLKLGGRPVIAHVWEKAIRSGATRVIVATDDPRIAEAV
EGFQGEVCMTATDHPSGTDRLAEVAAKSSFDTNAIVVNLQGDEPLMPPALIKQVAETLAA
QGAAAVATLAAPITDIDTMHDPHTVKLITDRQGRALYFSRAPIPWDRSGDTKTLLTCARR
HLGLYAYRAGFLQRYQQLAPSVFEQLEQLEQLRMLAAGEWIQVADAMTEPGHGIDTSADL
IAAETQIARGA
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccgaattcgttgtcgtcatcccggcccgctatggatcaacgcggctaccgggc
aaaccactcctgaaactcggcggcagaccggtgattgctcacgtctgggagaaggccatt
cggagcggggccactcgcgtcatcgttgccacggatgatccgcggatcgccgaggcggtg
gaagggtttcagggcgaggtctgcatgacggcgaccgaccatcccagcggtaccgaccgc
ctggcggaagtggcggcaaagtcctcattcgacaccaacgccatcgtcgtcaacctgcag
ggcgacgaaccactgatgccgccagcactgatcaaacaggtggcagagacgctggcggca
cagggcgccgccgccgtggcaacgttggccgcaccgatcacggacattgacacgatgcat
gacccgcacaccgtcaagctcatcaccgaccgccagggccgtgcgctgtacttcagtcga
gcgcccatcccgtgggatcgcagtggggacacgaagacattgctgacctgcgcccgacgc
cacctcgggctctacgcctatcgcgctggttttctgcaacgttatcagcaactcgcgccg
agtgtcttcgaacaactcgagcaattggagcagctcagaatgctggcggcgggggagtgg
attcaggtggcggatgccatgaccgaacccggccacggcatcgatacctccgcggatctg
atcgctgcggagacacaaatcgcccggggcgcctag
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