Spiribacter sp. 2438: GJ672_04735
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Entry
GJ672_04735 CDS
T06294
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
spiz
Spiribacter sp. 2438
Brite
KEGG Orthology (KO) [BR:
spiz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spiz03016
]
GJ672_04735 (truD)
Enzymes [BR:
spiz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
GJ672_04735 (truD)
Transfer RNA biogenesis [BR:
spiz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GJ672_04735 (truD)
Prokaryotic type
GJ672_04735 (truD)
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Ortholog
Paralog
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GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QGM21642
UniProt:
A0A6B8JTN3
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All DBs
Position
complement(931757..932899)
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AA seq
380 aa
AA seq
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MDGVYRSGGRHRRHGRDHGGPTRRGPGVSAPPISPIKGLRAWGAPLGTAVVASTPADFQV
HEQLGFRATGDGPHLLIHVEKRDLATAEAIRRLARYWGVSPKNIGYAGRKDRQAVTRQWL
TLPWPEDASLPPVGAVEEGMHLLAVARHRRKLRVGAHVGNRFRLVLRDLEVSGKALEQRL
KCIAFQGVPNYFGPQRFGRDGRNLERAMAWSHGDPRARPRGRSERGMLLSTLRSECFNRV
LAARVADRSWNRPAGDDVVILDGRGSVFPATRESPGRLQRRAAGLELHATGPLPGRPGGN
MELQPSLMEHEAQALGAMRDVPAWLAEMKLEASRRSLRLLPSGLCWHQPEPDQLVLEFTL
PPGGYATTVLREVVNWSAPE
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggatggggtttaccggtcgggaggaaggcatcgccgccatggccgtgatcatggtgga
ccgacccgccgcggaccgggcgtgagcgccccgccgatatcacccattaaggggctgcgg
gcctggggggcgcccctgggcaccgcggtggtggcgtccacgcccgccgacttccaggtt
catgaacagctcggcttcagggccaccggcgatggcccgcatctgctgatccacgtagaa
aagcgcgatctcgccaccgccgaggcgattcggcgccttgcccgttattggggggtctcc
ccgaaaaatatcggttatgccggtcgcaaggatcgtcaggccgtgacacgccagtggctg
accttgccgtggcccgaggatgccagcctcccgccggtgggggcggtggaggaaggaatg
cacctgctggctgtagccaggcaccggcgcaagttgcgggtgggtgctcatgtcggcaat
cggttccggctggtgttgcgggatctggaagtctcggggaaagccctcgagcagcggctg
aagtgcattgcctttcagggggtccccaattacttcgggccgcaacgattcgggcgggat
ggccgcaacctggaacgcgccatggcctggagtcatggtgacccgcgagcacggccgcgc
ggacgcagcgaacgggggatgctgctctcgacgttgcgcagtgagtgcttcaaccgcgtg
ttggccgcacgggtggcagaccggtcctggaaccggcccgccggggatgacgtcgtgatt
ctcgacggacgcggtagcgtattcccggcaacgcgggaatcaccgggacggctgcagcgt
cgcgccgcgggcctcgagctgcatgccaccgggccgctgccgggtcgtcccggcggcaat
atggaactccagccatcgctgatggagcacgaggcgcaggcgctgggcgccatgagggac
gtccccgcttggcttgccgaaatgaagctggaggccagccgccgctcgctgcgccttttg
ccaagcggtctttgctggcatcaacccgagcccgaccagctggtgctggagttcaccctg
ccaccgggtggctacgccaccacggtgctccgggaagtggtgaactggtcagcgccggag
tag
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