Spiribacter sp. 2438: GJ672_04760
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Entry
GJ672_04760 CDS
T06294
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
spiz
Spiribacter sp. 2438
Pathway
spiz00541
Biosynthesis of various nucleotide sugars
spiz01100
Metabolic pathways
spiz01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
spiz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
GJ672_04760 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
spiz01005
]
GJ672_04760 (kdsA)
Enzymes [BR:
spiz01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
GJ672_04760 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
spiz01005
]
Lipid A
GJ672_04760 (kdsA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
QGM21646
UniProt:
A0A6B8JS97
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All DBs
Position
complement(935596..936447)
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AA seq
283 aa
AA seq
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MTLQVAGQSIGPDQPLFLIAGPCVVESRELTLEIAGNLVEMTRQRGIPFVFKASFDKANR
SSAASYRGPGLDQGLEVLETVRRDLGVPVLTDVHEYTPLDEVAAVVDWLQTPAFLCRQTD
FIQSVARCNLPVNIKKGQFLAPGDMTNVVDKARATGNSRITVCERGVSFGYNNLVADMRG
LAVMRDTGAPVVFDATHSVQLPGGQGHASGGQREHVPVLARAAVAAGISGLFMETHPRPD
EARSDGPNSWPLGHLAELLDTLMELDAVVKHHGYAESKHQRSD
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgcaggtcgccgggcaatccatcgggcccgatcagccgctgttcctgatcgcc
gggccctgcgttgtcgagagtcgggagctgaccctggagatcgcgggcaacctggtggag
atgacccggcaacggggtatcccctttgtcttcaaggcctccttcgacaaggccaaccga
tcctcggcggccagctaccggggcccgggtctggatcagggtctggaggtcctcgagact
gtccgtcgggatctgggcgtgccggtgctgaccgatgtccatgagtacacgccgctcgat
gaggtcgcggcggtggtggactggctgcagacgccggcgtttctgtgtcgccagaccgac
ttcatccagtccgtggcgcgctgcaatctcccggtcaatatcaagaaagggcagttcctg
gccccgggcgacatgaccaatgtggtggacaaggcccgcgccaccggcaattcgcgcatc
accgtctgcgaacgcggtgtgagcttcgggtacaacaacctggtggcggacatgcggggt
ctcgcggtaatgcgggacaccggcgctccggtggtttttgatgccacccactcggtgcag
ttgccgggggggcaggggcacgcctcggggggacagcgggagcatgtgccggtattggcg
cgcgccgcggtggccgccggcatcagcggactgttcatggagacgcacccccgcccggac
gaggcacggtccgatggcccgaacagttggccccttggccacctggcagagctgctggac
accctcatggagctggacgccgtggtcaaacaccacggatatgcagaatcaaaacaccaa
aggagtgactga
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