Spiribacter sp. 2438: GJ672_06480
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Entry
GJ672_06480 CDS
T06294
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
spiz
Spiribacter sp. 2438
Pathway
spiz03030
DNA replication
spiz03430
Mismatch repair
spiz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spiz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GJ672_06480
03430 Mismatch repair
GJ672_06480
03440 Homologous recombination
GJ672_06480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spiz03032
]
GJ672_06480
03400 DNA repair and recombination proteins [BR:
spiz03400
]
GJ672_06480
Enzymes [BR:
spiz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GJ672_06480
DNA replication proteins [BR:
spiz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GJ672_06480
DNA repair and recombination proteins [BR:
spiz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GJ672_06480
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
DUF2752
Motif
Other DBs
NCBI-ProteinID:
QGM21940
LinkDB
All DBs
Position
1301685..1302392
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AA seq
235 aa
AA seq
DB search
MKAPAGSDWPAWLAHRAEASGSESLRGYYASLGWDPGQAIADTPLVAVDLETSGLDPRRH
AILSIGVLPFTLQGIRLADRRQWLLRPPAGFSGESVAFHHITHGDIEQAADFEAVLPALL
DTLAGRLMVVHYHPLERRFLDHATRMRLGETLKCPMIDTMELEARRHRQGWGSRWRALLG
RTPTSLRLNDSRARYGLPPYEGHRAVLDALATAELLQAQIQHAYNPSTPLESLWV
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgcccgccggcagcgactggcccgcctggctggcgcatcgggccgaagcgtcc
gggtccgagtctttgcggggctactatgcgtcgctggggtgggatcccggccaggcgata
gcagatacgccgctggtggccgtggacctggaaaccagcggcctggacccccgccgtcat
gccattctgagcattggcgtgctgccgtttaccctgcagggcatccggctggccgatcgc
cgccagtggttgttgcgccccccggccgggttttccggtgagagcgttgcctttcatcac
atcacccatggcgatatcgaacaggcagcggacttcgaagcggtcctgccggcgctcctg
gacacgctggccggacgattgatggtggtgcactaccacccgctggagcgccgttttctg
gaccatgccacccgaatgcggctgggcgaaacgctgaagtgcccgatgatcgacaccatg
gaactggaagcccgccggcatcgacaggggtggggaagccgttggcgggctctgctgggc
cgaaccccgacttcactgaggctcaatgacagccgggcccgttacggcctgcccccgtat
gaagggcatcgagccgtgctcgatgccctggccaccgccgagttgctgcaggctcagatc
cagcatgcctacaacccctcgacgccgctggagtcactctgggtctag
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