Spiribacter sp. 2438: GJ672_06505
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Entry
GJ672_06505 CDS
T06294
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
spiz
Spiribacter sp. 2438
Pathway
spiz03030
DNA replication
spiz03430
Mismatch repair
spiz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spiz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GJ672_06505
03430 Mismatch repair
GJ672_06505
03440 Homologous recombination
GJ672_06505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spiz03032
]
GJ672_06505
03400 DNA repair and recombination proteins [BR:
spiz03400
]
GJ672_06505
Enzymes [BR:
spiz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GJ672_06505
DNA replication proteins [BR:
spiz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GJ672_06505
DNA repair and recombination proteins [BR:
spiz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GJ672_06505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
AAA_22
RuvB_N
AAA_5
AAA_30
AAA_18
AAA_16
AAA_2
RCF1-5-like_lid
AAA_14
AAA_19
PIF1
Mg_chelatase
Herpes_Helicase
AAA_7
TsaE
AAA_28
SKI
nSTAND3
DUF3646
Rad17
Motif
Other DBs
NCBI-ProteinID:
QGM21945
UniProt:
A0A6B8JSG6
LinkDB
All DBs
Position
complement(1305589..1307322)
Genome browser
AA seq
577 aa
AA seq
DB search
MTYQVLARKWRPRSFAEMVGQEHVLRALANGLANGRLHHAYLFSGTRGVGKTTVARILAK
CLNCETHGVTDVPCGECSACTDIDAGRFVDLIEVDAASRTKVEDTRDLLDNVQYAPTRGR
FKIYLIDEVHMLSTHSFNALLKTLEEPPAHVKFLLATTDPQRLPVTVLSRCLQFNLKPLL
PKPIVDHLGRIAEAEGVSAEPAALQRLATAAAGSLRDALSLTDQALAFGAGALRDAEVRD
MLGTLPQEHLCELLECLADGDGAELLAAVERLAEASPDFDEALSELLAVLHQLTLAETVP
EVFDQETPQSQRLAQIVGRFDGPGLQLMYDIAVRGRRDLALAPDPRTGFEMTLLRMLAFQ
PEAGAADGSPPPAVKSSTARSSAAAPSGPQASAVAEAAESAEPASAEPVPAEADRTEPAP
AEADPTEPVPAEADSAEPAPAEAAGAKPASAEAVDWHALVEALGVTGMARALADHCEWAG
QEGDRVRLAIDEGHAHLVNPTTQTRLAKALAKRFGDGLRIDIQVGAAGGDTPAAAAERVE
NERQAKARAAIESDPNIQALRDTFGAEVISESIRPKQ
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgacatatcaggtgctcgcccgcaaatggcggccccgcagttttgcggaaatggtcggt
caggaacatgtcctgcgtgcgctggcgaacggactggccaacgggcgccttcaccatgcc
tacctgttctccggcacccgcggtgttggcaaaaccacggtggcacgaattcttgccaag
tgcctcaactgcgagactcatggcgtcaccgatgtgccctgcggtgaatgttccgcgtgc
accgatatcgacgccggtcgcttcgttgacttgatcgaggtggacgccgcctcacggacc
aaggtcgaagacacccgggatttgctggacaacgtccagtacgcgcctacccggggccgc
ttcaagatctatttgattgacgaagtgcacatgctctcgacgcacagcttcaacgccctg
ctgaaaaccctcgaagagccgccggcgcatgtaaagtttctgctggccaccacggacccc
cagcgtctgccggtgaccgtgctgtcgcgctgcctgcagttcaacctcaagcccctgctg
cccaagcccatcgtcgaccacctgggccgcatcgccgaggccgaaggcgtcagcgccgag
ccggcggcgttacagcggctggcgacagcggccgcgggcagccttcgtgatgcgctgagc
ctgaccgaccaggccctggccttcggcgccggcgccttgcgggatgccgaggtgagggac
atgctcggtacgctgccccaggaacacctctgcgaactgctggaatgtctggcggacggc
gacggcgccgaattgctggcggcggtggagcgcctggccgaggcatcgccggattttgac
gaggcgctgtccgagctgctggccgtgcttcatcagctgaccctggctgaaaccgtgccg
gaggtcttcgatcaggaaacgccgcaaagccagcggctggcacagattgtgggccggttc
gacgggcccgggctgcagctcatgtacgacatcgccgttcgtggccgccgggatctggcg
ctggcgccggacccgcgcaccggattcgagatgacgctgctgcggatgctggcatttcag
ccggaggcgggggcggccgacggatccccgccgccggcggttaaaagctcaacggcccga
tcatccgcagcggccccttccgggccccaggcatcagccgttgccgaagccgctgaatcc
gccgagccggcttctgccgagccggtccccgctgaggctgaccgcaccgagccggccccc
gctgaggctgaccccaccgagccggtgcccgctgaggctgactccgccgagccggctccc
gccgaggctgccggcgccaagcccgcctccgccgaagcggtggattggcacgcgctggtg
gaggcgctgggcgtcaccggcatggcccgggcgctggccgaccattgtgagtgggctggc
caggagggcgaccgtgttcggctggccatcgacgagggccatgcccacctggtgaatccg
acgacccagacccgactggccaaggcactggcaaagcgcttcggcgatggtctgcgcatt
gacatccaggtgggggccgccggcggcgataccccggcggccgccgcggaacgcgtggag
aatgagcgccaggccaaagcccgcgctgccatcgaaagcgaccccaatattcaggcactt
cgggacacattcggtgccgaagtcattagcgaatccatccggccgaagcagtag
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