KEGG   Spiribacter sp. 2438: GJ672_06940
Entry
GJ672_06940       CDS       T06294                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
spiz  Spiribacter sp. 2438
Brite
KEGG Orthology (KO) [BR:spiz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:spiz03400]
    GJ672_06940
Enzymes [BR:spiz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     GJ672_06940
    5.6.2.6  RNA 3'-5' helicase
     GJ672_06940
DNA repair and recombination proteins [BR:spiz03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    GJ672_06940
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: QGM22017
LinkDB
Position
1410124..1412586
AA seq 820 aa
MTAIDETPLNAWFAAKGWQPASFQKAAWQAHARGESGLIHSATGSGKSLAAWGGPLAEGL
GEVNGSEKSRRPGVRVLWITPLRALAGDTQRNLRDAAEGVGLPWRVETRTGDTASSARQR
QRKNPPEALITTPESLSLLLSYTDADRYFRQLTTVIVDEWHELLGSKRGVQLELCLARLR
RLQPRLRTWGLSATLGNLDEAMATLLGPGADEGRLIEGAAPRPLRIEALLPEASGRFPWA
GHLGTHLIDGVIDHLSQPGSCLLFTNTRSQAEIWFESLLRARSDWLEGLGLHHGSIDREL
RRRIEAGLAAGDFRCVVATSSLDLGVDFSPVDRVIQVGSPKGVARLAQRAGRCGHQPDGI
SGVLCVPSHALELVEIAAARRAWADGDVEARRPLRLCLDVLAQHLVTLATGGGFEAPSTL
EEIRTTHAFADLSKEAWDWTLTFITRGGPVLEAYPDFHRVARDHQGLFRIADRRQAARHR
MSIGTITSDAAMQVRYQGGGYLGTIEESFIVRLRPGDVFLFAGRSLELLRVRDLTAYVRR
AGRRRQAVPRWQGGRLPLSGMLADRVLELLAEAADGQYREPEMQALRPLLEIQRQWSALP
APGRLLVERTRSREGEHLFIYPFAGRLAHEGLATLLAWRLAQRTPATFSIAANDYGFELL
GAEMPALQETDLRPLLSQEGLVDDLLSSMNASELARRQFRDIARIAGLIFQGYPGQGKSA
RQLQASSGLIFDTIARYDPDHRLVDQARREVLEEALEIHRLRQTLSHIEQADIHLAETER
FTPLAFPLWAERLRNRLSSQSWEDRVARMIGQLEKAADRP
NT seq 2463 nt   +upstreamnt  +downstreamnt
atgaccgccatcgacgagacccctctcaacgcgtggtttgcggccaaaggctggcaaccc
gcgtcctttcagaaagccgcctggcaggctcacgcccggggtgagagcggtctgatccac
tcagccaccggatccggtaaatccctggcggcctggggtgggccgctcgcggaaggcctc
ggcgaggtcaacggctcggaaaaatcccgacgcccgggcgttcgggtcctatggatcacg
ccgctgcgggccctggccggtgacacccagcgcaatctccgcgatgccgccgagggtgtg
ggtctaccctggcgggtggaaacgcggaccggcgacaccgctagcagcgcccgtcagcgg
cagcgcaaaaatccgccggaggcactgattaccaccccggaaagcctctcgctgctgctc
tcctacacggacgcggatcgctactttcgacagctgaccaccgtgatcgtcgatgagtgg
catgagttgctgggcagcaagcgtggcgttcagcttgaactctgtctggcccggctgcga
cgactgcagccccggcttcgcacctggggcctgtccgccaccctggggaacctggatgaa
gccatggccaccctgctgggcccgggcgctgacgaagggcgactgatcgagggggcggca
ccccggccccttcgcatcgaggccctgttgcccgaggccagcgggcggttcccctgggcc
ggccatctgggcacgcacctgattgacggcgtgatcgatcatttgagccaaccaggcagc
tgcctgttgttcaccaacacccgctcccaggcggagatctggttcgagtcgctcctgcga
gcccggagtgactggctggaggggctgggtctgcaccacggctccatcgaccgggagctg
cgtcgacgcatcgaagccggcctcgccgcgggagactttcgctgtgtggtggccacctca
agcctggatctgggagtggacttctcgccggtggatcgggtcattcaggtgggcagcccc
aagggagtggcccggcttgcccagcgtgccggacgctgcggacaccagccggacggaatc
agcggtgttctctgcgtccccagccacgcgcttgagctagtggaaatcgcagcggcccgc
cgggcctgggcggatggcgacgtggaggcccgacggccactgcgcctgtgcctggatgtg
ctcgcccagcatctggtcacgctggccacggggggcgggttcgaagcgccatcgaccctg
gaggagatccgcaccactcacgcgtttgcggatctctccaaggaggcctgggactggaca
ctgaccttcatcacccgcggcggaccggttctcgaggcctatccggacttccatcgggtc
gcccgcgatcaccagggcctgttccgtatcgctgaccgacgccaggccgcccggcaccgc
atgagcataggcaccatcaccagtgatgcggccatgcaggtccgctatcaggggggcggg
tacctgggcaccatcgaggagagtttcattgtccgactccggcccggggacgtttttctc
ttcgccggccgcagcctcgagttgctgagggtgcgggatctcacggcttatgtccgacgc
gccgggcggcgccggcaggcggtgcctcgctggcagggcggccgcctgccgttgtccggt
atgctggcggaccgggtgctggagctgctcgccgaggcggctgacgggcaataccgggag
ccggagatgcaggcgctccgaccgctgctggagatccagcggcaatggtcggcgctgccg
gcaccggggcgccttctggtggaaagaacccgatcccgggagggcgagcatctgttcatt
tatcccttcgccggccggttggcccatgagggcctggccacattgctggcctggcggctg
gcacaacggacaccggccacctttagcattgccgccaacgactatggcttcgaactgctg
ggcgccgaaatgcccgcgctccaggaaaccgacctgcgacctctgctgagccaggaaggg
ctggtggatgatctgttgagcagcatgaacgccagcgaactggctcggcggcaattccgg
gacatcgcccgaatcgcggggctgatttttcaaggctatcccggacaggggaaaagtgcc
cggcagctccaggcgtccagcgggctcatcttcgacaccattgcccgctatgacccggat
caccggctggtggatcaggcacgacgggaggtccttgaggaagcactggagattcatcgg
ctaaggcagacactaagccacatcgagcaggccgacattcacctggcagagactgagcgg
ttcacaccgctggcttttccgctttgggcagagcgactgcgaaaccggctcagtagccag
agctgggaagaccgggtggcccgcatgatcggccagctggaaaaggcagcggaccgacca
tga

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