Spiribacter sp. 2438: GJ672_06955
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Entry
GJ672_06955 CDS
T06294
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
spiz
Spiribacter sp. 2438
Brite
KEGG Orthology (KO) [BR:
spiz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spiz03400
]
GJ672_06955
Enzymes [BR:
spiz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
GJ672_06955
DNA repair and recombination proteins [BR:
spiz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
GJ672_06955
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
QGM22020
UniProt:
A0A6B8JRN3
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All DBs
Position
complement(1414225..1415793)
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AA seq
522 aa
AA seq
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MSQKRLIVVLGDQLDRRGPLLRDLDARQDEVWMAEAPGEARRGWNHQQRLVLFFSAMRHL
RDELREAGVTVHYRRIDESPGSGTAAEPGPGLAELLAEDLARLTPRRVAMMETGHWQVEQ
DCLAAIKAASVPLDWFEDDHFLASRGDFASWAEGRKSLTLEYFYRNMRKRYDVLMEGGKP
AGGAWNFDRDNRQAFGAEGPGDLPRHPVFSPDPLTCEVIETVRALFPDHPGDAREFDQPV
TPEQAGAALSDFITHRLSHFGSHQDAIWTGEPLLYHARLSAALNLHLLNPRDCIAAAEQA
WQDQRAPINAVEGFVRQVLGWREFVRGVYWFSMPEYAHGNALAHHEALPSFFWDGDTDMV
CVADAMQGLLRHGYAHHIQRLMVLGLFAQLYGTNPYRFHEWHLAMYLDAVDWVSLPNALG
MSQYGDGGVVGTKPYCASGAYIHRMSNACGQCRYNPRQATGEGACPFTTLYWDFLDRHES
RLGDNRRLQFQFKNLQRKTPAERQAIREQAAALRNRLAGEAH
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaaagcgcctgatcgtggtgctcggggatcagctggatcgccggggaccgttg
ctgcgggatctggacgcccgccaggacgaagtctggatggcggaagcccccggtgaggcc
cggcggggctggaaccaccagcagcgcctggtgctgttcttctcggccatgcgtcatttg
cgcgacgagctgcgggaggccggggtcaccgttcattatcgccggattgacgaatcgccg
ggatccggtacggccgcggaacccggcccggggctggccgaactgctcgcagaggatctg
gcgcgtctcaccccgaggcgggtggcgatgatggagaccgggcactggcaggtggagcag
gactgcctcgcggcgattaaagccgccagtgttcctcttgactggttcgaagatgatcat
ttcctggcaagccgcggggactttgcgtcctgggccgagggtcgcaagagcctcactctt
gaatacttctatcgaaacatgcgcaagcgctacgacgtgttgatggaagggggcaaaccc
gccggaggcgcgtggaactttgatcgcgataaccgccaggcattcggtgccgagggtccg
ggtgacctgccgcggcatccggttttcagccccgacccgctgacctgcgaagtcatcgag
acggttcgggcgctcttcccggatcatcccggtgacgcccgggagtttgatcagccggtg
acccccgagcaggctggcgccgctctgtcggacttcatcacccaccgtctcagccatttt
ggcagtcatcaggacgccatctggaccggcgagccgctgctgtaccacgcgcgtctttct
gccgccctcaatcttcatctgctcaatccccgggactgcattgcggccgccgagcaggcc
tggcaggaccagcgagcgcccatcaacgcggtggaaggattcgtgcggcaagtgctggga
tggcgggagttcgtgcgcggggtgtactggttcagcatgccggagtacgcccacggcaac
gcgctggcgcatcatgaggcgttgccgtcatttttctgggatggcgataccgacatggtc
tgcgtcgccgatgccatgcaggggcttttgcggcatggctacgcccatcacatccagcgg
ctgatggtgctcgggctctttgcccagctgtacgggaccaatccctaccggttccatgaa
tggcacctggccatgtacctggatgcggtggactgggtcagcctgcccaacgcactgggc
atgagtcagtatggagacggcggcgtggtgggcaccaagccctactgcgccagtggcgcg
tacatccatcgcatgagtaacgcctgcgggcagtgccgttataatccccgccaggcgacg
ggcgagggcgcctgtccattcacaacgctatactgggactttcttgatcggcatgaatcc
aggctgggggacaatcggcggctgcagtttcaattcaagaacctgcagcgtaagacgcca
gccgagcggcaggcaattcgcgaacaggccgcagcgttacggaaccgtctggcaggcgag
gcccactga
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