Spiribacter sp. 2438: GJ672_08165
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Entry
GJ672_08165 CDS
T06294
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
spiz
Spiribacter sp. 2438
Brite
KEGG Orthology (KO) [BR:
spiz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spiz03016
]
GJ672_08165 (miaB)
Enzymes [BR:
spiz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
GJ672_08165 (miaB)
Transfer RNA biogenesis [BR:
spiz03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
GJ672_08165 (miaB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
QGM22232
UniProt:
A0A6B8JVB1
LinkDB
All DBs
Position
complement(1642963..1644342)
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AA seq
459 aa
AA seq
DB search
MTQKVYVRTHGCQMNEYDSIKMVDVLAAEGDYQRVKTPEEADVILLNTCSIREKAQEKVF
SELGRWRELKAARPGTLIGVGGCVASQEGAAIVERAPFVDMVFGPQTLHRLPDMVKQARD
SGRAVVDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCSKYCSFCVVPYTRGEEISRPFED
VLAECAELAEQGVREVTLLGQNVNGYDGPTDEGERADLGLLIHYIAAIDGIERIRFTTSH
PLDFNQSLVDAYAEVPELVGHLHLPVQSGSDNILTLMKRNHTREYFLDLVNRLREARPDL
TLSSDFIIGFPGEMRKDFEATMDLVEQVGFDQSFSFIYSKRPGTPAAQLPDAASLEDKKA
RLQRLQKTLDANAAAISEAMVGRVESVLVDGVSKKDAAEIKGRTENNRVVNFPGNRRLIG
RFVNVRITEALAHSLRGEMVGIDLAREPDLQVDDIGVAG
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgacacagaaggtttacgttcgaacccacggctgccagatgaatgagtacgactccatc
aagatggtggatgtgcttgccgccgagggtgactatcagcgggtcaaaacgccggaagaa
gccgacgttatcctgctcaacacctgctccatccgcgaaaaggcccaggagaaggtgttc
tccgagctgggccgctggcgcgaactcaaggccgcccggccggggacgctgatcggtgtg
ggcggttgcgtggccagtcaggaaggcgccgccatcgtcgagcgcgctccctttgtggac
atggtgttcgggccgcagacactgcaccgcttgccggacatggtgaaacaggcccgcgac
agcggtcgcgcggtggtggacatcagcttcccggagatcgagaaattcgaccgcctgccc
gagccacgagcagagggccccacggccttcgtctccatcatggaaggctgcagcaagtac
tgcagcttctgcgtggtgccctacacccggggcgaagaaatcagtcggccgtttgaggat
gtgctggccgagtgcgcggagctggcagagcagggggtgcgggaagtcacgctgctgggc
cagaacgtcaatggttacgacggccccaccgatgagggagagcgggcggatctggggctg
cttatccactacattgcggccatcgatggcatcgagcggatacgcttcaccacctctcat
ccgctggatttcaatcagtccctggtggacgcctacgccgaggtccccgaactggtgggg
cacctgcacctgccggtgcagagcggctcggacaacatcctcacgctcatgaagcgcaac
cacacccgtgagtatttcctcgacctggtgaaccggctgcgggaggcgcgcccggatctc
accctgtcgtcggatttcatcattggtttccccggcgaaatgcgcaaggacttcgaagcc
accatggatctggtggagcaggtgggtttcgaccagtccttcagttttatttactcgaag
cgaccgggtacccctgctgcgcagctgccggacgcggcatccctggaggacaagaaagcg
cgcctgcagcggttgcagaagaccctggatgccaacgcggccgccatcagtgaagccatg
gtggggcgcgtggagtcggtgctggtggatggcgtatccaaaaaggacgccgccgagatc
aaggggcgcaccgaaaacaaccgggtggtgaatttcccgggcaatcggcggttgatcggc
cgcttcgtgaacgttcgcatcaccgaggcgctggcgcattccctgcgtggcgaaatggtc
ggtatcgacctcgcgcgggagccggaccttcaggtcgatgacattggtgtggcgggttga
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