Sphingopyxis sp. J-6: V6U71_01670
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Entry
V6U71_01670 CDS
T10764
Name
(GenBank) RHS repeat-associated core domain-containing protein
Organism
spjj Sphingopyxis sp. J-6
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GFIT
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NCBI-ProteinID:
XMG40802
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Position
309245..313426
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AA seq
1393 aa
AA seq
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MGVGLAPQLWAQATPPPIRSAIDENGVDVITGNLNLAQTDLSIGADARQGVVFRRTNNGT
GWWNNLVGSIDKQGIAFTVSFDGFTDRFLLSGSTYTPTEANGATLTKSGTTYTYTGRDGT
VATFAAQGDKFQVFSGNEARITSIVYPNGAKLSFDYETGVYCEGGIEGGGCVGQIVKLAR
LTSANHSNGYRLVPSYATDFFSEETAPSWLKVQSVKAINLGVEYCSSSCTNSWPTASYSN
SSPGGGLTYNFVTDAGGEQTRYTTSGGKIVGIKRPGASADNVQVTYTSNRVSSITSEGVT
YGYSYADSGATRTTTVTAPDSSQRVYVSNTTTARLTSFTDELSRTTSYLYDTDGRVTRIT
SAEGNYTQLTYDGRGNVTQTQNVAKSGSGLAAITTSASFPASCTNSKTCNQPATSTNAMG
DVTDYTYNSTHGGVATITLPAAASGGIRPQQRISYTGLTAYFKNSAGSIVSSGQTTYVPT
QSAACQTTASCTNGADETKTVVGYGPQTAGTANNLLPVSITTSSGTGSVSSATALGYDMV
GNRITVDGPLTGTADTTRYRYDGARRVVGVVAPDPDGAGSRVHKAEKLTYNDDGQVTLAE
IGTVASQTDPAWAAFSSQQQVATTYDANARPVRSELKSGGTTYAVSQTSYDALGRVDCSV
TRMDPAQWASQPNACLPQTSNTTTGPDRVVKTSYTDAGEVAQVQTAYGTAAVANEVTNTY
SNNGRLASVKDAENNLTTYIYDGHDRLSQTRFPSTTKGAGTSNAANYEQLTYNANGAVTQ
LRLRDAQTIAYSYDDLGRVTLKNLPGTELDVSYSYDLLGRPTQASQTGNILGFTYDALSR
NLTQSGPLGTTTYTYDAAGRRLTMAYPGATALTLNYDYDVTGNVTKIRENGATSGAGVLG
TYAYDSLGRRTTLTRGNATVTSYSFDPVSRLSSLTQNLAGTASDLTIGSIAYNAASQIVS
QQRSNDAYAWTAHYNVDRSYVANGLNQTTSAGGTAVGYDTRGNLTSSGTDSYTYSSENLL
KTGPGSATLAYDPALRLYQTVGSATTRFQYDGTSLIAEYNGSNALQRRFVHGPGVDEPLV
WYEGTGLIDRRWYHADERGSIVAVSNGTGAALGINAYDEYGIPASANLGRFQYTGQTWLP
ELGLYYYKARIYSPALGGFMQTDPIGYADGMNWYNYVGSDPVNGTDPTGLLNACDANRDC
PKPAGYDLDYGAKETLQWGRDLVVNGTLPGKGPSDPTPVYAGGGLNSNGVGYAGGDNGEA
IDVFANCRKGVNCRAYVQASGAWHAPMLVPPQPPLVVPKAWPKETDEMKRARLKREQKYY
ENLSEEAQRSLCAASVGQAMKDSMGWSIATGVAGGAAGAMAGEGFGPVGAMYGYLFSVWG
SGAQAYAQGPLCK
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
ttgggcgtcggccttgctccgcaactctgggcacaggctaccccgccgcccatccggtcg
gctatcgacgaaaatggcgtcgatgttatcacgggcaatctgaatctggcccagaccgat
ttgtcgatcggggccgatgcgcgccaaggcgtggttttccggcgaaccaacaacggcacc
gggtggtggaacaatctcgtcggctcgatcgacaagcagggcattgcctttaccgtttca
tttgacggattcaccgatcgcttcctgttgtcgggatcgacctacacgccgactgaagcc
aatggcgcgaccctgacgaaaagcggcacaacttatacctatacgggccgcgacgggacg
gtcgcgacattcgctgcacaaggcgacaagtttcaggttttcagcggcaacgaggcgcgg
atcaccagcatcgtataccccaatggcgcgaaactcagtttcgactatgaaaccggagtc
tattgcgaaggcggaatcgaaggtggcgggtgcgttgggcaaattgtcaaactcgcgcga
ttgacgtcggccaatcatagcaatggttaccggctcgtcccgagctacgcgacagacttt
ttctcggaagaaacggccccgagctggctcaaagtgcaatcggtcaaggcgatcaacctt
ggcgtcgaatattgctcgtcgtcttgcacgaatagctggccgacggcgagttactccaac
tcgtcgcccgggggcgggctgacctataatttcgtgaccgacgccggcggcgagcaaacg
cgttacacgacgagcggcggcaaaatcgtcggcatcaagcgccccggcgcgtcggccgac
aatgttcaggtgacctatacgtcgaaccgcgtgtcgtcgatcaccagcgagggcgttacc
tacggctatagctatgccgacagcggcgcgacgcgcacgacgacggtgacggcgccggac
agcagccagcgcgtctatgtatcgaacacgacgacggcccggctgacctccttcaccgac
gaactcagccgcacgaccagctatctttacgatacggacggccgcgtgacgcgcatcacc
agcgccgaggggaattatacccagcttacctatgatggtcgcggcaatgtcactcagacg
caaaatgtcgccaagtccggttcgggccttgcggcaatcacgacgtcggcgagcttcccg
gcgtcgtgcaccaattccaagacctgcaaccagcccgcgacgagcaccaatgccatgggc
gatgtcaccgactatacctataacagcacgcatggcggggtggcgacaatcacgctgccg
gccgcggcgtcggggggcattcgcccgcagcagcgcatcagctacacgggactgaccgcc
tatttcaagaacagcgccggatcgatcgtctcctcgggccagacgacctatgttccgacg
cagagcgccgcgtgccagacgaccgcgtcctgtaccaacggcgccgacgaaacgaagacg
gtcgtcggctacgggccccagacggccgggaccgcgaacaatcttttgccggtcagcatc
acgaccagttcgggcactggctcggtcagctcggcgaccgctctcggctatgacatggtc
ggcaaccggatcaccgtcgacgggccgctgaccggcaccgccgatacgacccgatatcgc
tatgacggcgcgcgccgcgtcgtcggcgtggtcgcgcccgatcccgatggcgcgggcagc
cgcgttcacaaggccgaaaagctcacctataatgacgacggtcaggtgaccctcgccgaa
atcgggacggtggcgagccagaccgatcctgcctgggcggctttctcgtcgcagcagcag
gtcgccaccacctatgacgccaatgcgcgccccgtccgctccgaattgaagtcgggcggc
acgacctatgccgtgtcccagaccagctatgatgcgctcgggcgtgtcgattgttcggtg
acgcggatggacccggcgcaatgggcgagccagcccaacgcctgcttgcctcagacgagc
aacactaccaccggccccgaccgggtcgtcaagacgagctacaccgacgctggtgaggtg
gcgcaggtgcagaccgcctatgggacggctgcggtcgcgaacgaagtgaccaacacctac
agcaacaacggtcggcttgcgtcggtcaaggacgccgagaataatctgacgacctatatc
tacgatggtcatgaccgtctgtcgcagacgcgctttccgtcgacgaccaagggggcgggg
acgagcaacgcggcgaattacgagcagcttacctacaatgccaatggcgcggtaacgcag
cttcggctgcgcgatgcccagacgatcgcctatagctatgacgatttgggccgggttacg
ctcaagaatctgccggggaccgagctcgatgtcagctatagctacgacctgctcggccgt
ccgacgcaggcgagccagacgggcaatatactcggcttcacctatgatgcgctgagccgc
aacctgacgcagagcgggccgctcggtaccaccacttacacctatgacgctgcaggtcgg
cggctgaccatggcctatccaggggccacggcgctgacgctgaattatgattatgatgtg
accgggaacgtcaccaagatccgcgagaatggcgcgacgtcgggtgcgggtgtgctcggc
acctatgcctatgacagcctcggacgccggacgacgctgacgcgtggcaatgcgacggtt
accagctacagcttcgaccccgtatcgcggttgtcgagcctgacgcagaatctggcgggc
acggcctccgaccttaccatcgggtcgatcgcctataatgccgcctcgcagatcgtcagc
cagcagcgcagcaatgacgcctatgcctggacggcgcattataacgtcgatcgttcttat
gtggcgaacgggctcaaccagacgacttcggcgggtggtacagcggttggctatgatacg
cggggtaacctcacgagttcggggaccgacagctacacgtacagctcggagaatctgttg
aagaccggtccgggcagcgcaacgctggcctatgacccggcgctgcggctgtaccagacg
gtggggtcggcgacgacgcgtttccaatatgacgggacgagcctgatcgccgaatataat
gggtcgaacgccctgcaacggcgctttgttcatggtcccggcgtcgacgagccgctcgtc
tggtacgaggggacggggctgatcgaccggcgctggtatcacgccgacgagcgcggctcg
atcgtcgcggtgtcgaacggcaccggcgcggcgctgggcatcaatgcttacgacgaatat
ggcattccggcgtcggccaatcttggccggttccaatatacggggcagacttggctgccc
gaactggggctttattattacaaggcgcgcatctactcgccagccttgggggggttcatg
cagaccgatccgattggctatgcggatggcatgaactggtataattatgtcggtagcgat
ccggtgaacgggactgatccaacggggctcttgaatgcatgcgacgcgaaccgagattgc
ccgaagcccgcaggctatgatctcgactacggcgcgaaggagacgttacagtggggtcga
gacctcgtggtaaacggaacgctgccgggtaaaggtccgtcagacccaacccctgtatat
gctggcggagggcttaactcgaatggggtcggttatgccggcggagataatggcgaagcc
atcgacgttttcgcaaattgccgtaagggagtaaactgccgggcttatgtgcaggctagc
ggagcttggcatgcccctatgctagtgccgcctcagccccctctcgttgtgccaaaggcc
tggccaaaagaaacagatgaaatgaaacgagctcgacttaagagagagcaaaaatattat
gagaatctgtctgaagaggcgcagcgtagtctttgcgcggcatctgtgggacaagccatg
aaggactcgatgggatggtctatagcgactggcgttgcgggtggagcagccggcgccatg
gcaggagaaggctttggaccagttggtgcgatgtatggttatctattttcagtgtgggga
tcgggtgctcaagcctatgctcaaggtcctctttgtaaatag
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