Sphingopyxis sp. J-6: V6U71_04485
Help
Entry
V6U71_04485 CDS
T10764
Symbol
dnaN
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
spjj Sphingopyxis sp. J-6
Pathway
spjj03030
DNA replication
spjj03430
Mismatch repair
spjj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spjj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
V6U71_04485 (dnaN)
03430 Mismatch repair
V6U71_04485 (dnaN)
03440 Homologous recombination
V6U71_04485 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spjj03032
]
V6U71_04485 (dnaN)
03400 DNA repair and recombination proteins [BR:
spjj03400
]
V6U71_04485 (dnaN)
Enzymes [BR:
spjj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
V6U71_04485 (dnaN)
DNA replication proteins [BR:
spjj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
V6U71_04485 (dnaN)
DNA repair and recombination proteins [BR:
spjj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
V6U71_04485 (dnaN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
XMG41321
LinkDB
All DBs
Position
916685..917800
Genome browser
AA seq
371 aa
AA seq
DB search
MKATIERAVLLKSLGHVQSVVERRNTIPILSNVLIEADASGQLKLMATDLDLQVVETIAA
KVETPGTTTVSAHTLFEIARKLPEGTEVSLAAAEGKMQVKAGRSNFNLPTLPRDDFPVIA
EGDLPTNFELPVAELIQIIDKTRFAISTEETRYYLNGIFLHVAEDASGPVLKAAATDGHR
LARYTVTRPDGASSMPDVIVPRKCVGEIRKLLDEAEGNVEISLSASKIRFQLGNAVLTSK
LIDGTFPDYSRVIPTANDKLLKVDPKSLFQGVDRVSTIASEKTRAVKVGLDKDRITLSVT
SPENGTAAEELAAAYDSDAMEIGFNARYLSDILGQVDGDNVELHLADANAPTLIRESEKS
PALYVLMPMRV
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgacgatcgaacgcgcagtgttgttgaagagcctcggccacgtccagtcggtg
gtcgaacggcgcaataccatccccatcctctcgaacgtcctcatcgaagccgatgcgtcg
ggacagctcaaactgatggcgaccgacctcgacctgcaagtcgtcgaaaccatcgcggcg
aaggtcgaaaccccgggcaccacgacggtgtcggcgcacaccctgttcgaaatcgcccgc
aaactgcccgaaggcaccgaggttagcctcgccgccgccgagggcaagatgcaggtcaag
gccggccggtcgaacttcaacctgccgacgctgccgcgcgacgatttcccggtgatcgcc
gaaggcgacctgccgaccaatttcgaactgccggttgccgagctgatccagatcatcgac
aagacgcgcttcgcgatctcgaccgaggaaacgcgctattatctcaacggcatcttcctg
catgtcgcagaggatgcatcgggtccggtgctgaaggctgcggcgaccgacggccaccgt
cttgcccgctacacggtgacgcgccccgacggcgcctcgtcgatgcccgacgtcatcgtg
ccgcgtaaatgcgtcggcgagatccgcaagctgctcgacgaggccgagggcaatgtcgag
atcagcctgtcggcgagcaagatccgcttccagctcggcaacgccgtgctcacctcgaag
ctgatcgacgggaccttccccgattacagccgagtcatcccgaccgcgaacgacaagctc
ctgaaagtcgatcccaagagcctgttccaaggcgtcgaccgcgtctcgacgatcgccagc
gaaaagacccgcgcggtcaaggtcgggctcgacaaggatcgcatcacgctcagcgtcacc
agccccgaaaacggcaccgcggccgaagaactcgccgcagcttacgacagcgatgcgatg
gagatcggtttcaacgcccgttatctcagcgatatcctcgggcaggtcgatggcgacaat
gtcgaactccacctcgccgacgccaacgccccgacgttgatccgcgagagcgagaagagc
ccggcactttatgtgctgatgccgatgcgggtgtaa
DBGET
integrated database retrieval system