KEGG   Sphingopyxis sp. J-6: V6U71_04485
Entry
V6U71_04485       CDS       T10764                                 
Symbol
dnaN
Name
(GenBank) DNA polymerase III subunit beta
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
spjj  Sphingopyxis sp. J-6
Pathway
spjj03030  DNA replication
spjj03430  Mismatch repair
spjj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:spjj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    V6U71_04485 (dnaN)
   03430 Mismatch repair
    V6U71_04485 (dnaN)
   03440 Homologous recombination
    V6U71_04485 (dnaN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spjj03032]
    V6U71_04485 (dnaN)
   03400 DNA repair and recombination proteins [BR:spjj03400]
    V6U71_04485 (dnaN)
Enzymes [BR:spjj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     V6U71_04485 (dnaN)
DNA replication proteins [BR:spjj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     V6U71_04485 (dnaN)
DNA repair and recombination proteins [BR:spjj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     V6U71_04485 (dnaN)
SSDB
Motif
Pfam: DNA_pol3_beta DNA_pol3_beta_2 DNA_pol3_beta_3
Other DBs
NCBI-ProteinID: XMG41321
LinkDB
Position
916685..917800
AA seq 371 aa
MKATIERAVLLKSLGHVQSVVERRNTIPILSNVLIEADASGQLKLMATDLDLQVVETIAA
KVETPGTTTVSAHTLFEIARKLPEGTEVSLAAAEGKMQVKAGRSNFNLPTLPRDDFPVIA
EGDLPTNFELPVAELIQIIDKTRFAISTEETRYYLNGIFLHVAEDASGPVLKAAATDGHR
LARYTVTRPDGASSMPDVIVPRKCVGEIRKLLDEAEGNVEISLSASKIRFQLGNAVLTSK
LIDGTFPDYSRVIPTANDKLLKVDPKSLFQGVDRVSTIASEKTRAVKVGLDKDRITLSVT
SPENGTAAEELAAAYDSDAMEIGFNARYLSDILGQVDGDNVELHLADANAPTLIRESEKS
PALYVLMPMRV
NT seq 1116 nt   +upstreamnt  +downstreamnt
atgaaagcgacgatcgaacgcgcagtgttgttgaagagcctcggccacgtccagtcggtg
gtcgaacggcgcaataccatccccatcctctcgaacgtcctcatcgaagccgatgcgtcg
ggacagctcaaactgatggcgaccgacctcgacctgcaagtcgtcgaaaccatcgcggcg
aaggtcgaaaccccgggcaccacgacggtgtcggcgcacaccctgttcgaaatcgcccgc
aaactgcccgaaggcaccgaggttagcctcgccgccgccgagggcaagatgcaggtcaag
gccggccggtcgaacttcaacctgccgacgctgccgcgcgacgatttcccggtgatcgcc
gaaggcgacctgccgaccaatttcgaactgccggttgccgagctgatccagatcatcgac
aagacgcgcttcgcgatctcgaccgaggaaacgcgctattatctcaacggcatcttcctg
catgtcgcagaggatgcatcgggtccggtgctgaaggctgcggcgaccgacggccaccgt
cttgcccgctacacggtgacgcgccccgacggcgcctcgtcgatgcccgacgtcatcgtg
ccgcgtaaatgcgtcggcgagatccgcaagctgctcgacgaggccgagggcaatgtcgag
atcagcctgtcggcgagcaagatccgcttccagctcggcaacgccgtgctcacctcgaag
ctgatcgacgggaccttccccgattacagccgagtcatcccgaccgcgaacgacaagctc
ctgaaagtcgatcccaagagcctgttccaaggcgtcgaccgcgtctcgacgatcgccagc
gaaaagacccgcgcggtcaaggtcgggctcgacaaggatcgcatcacgctcagcgtcacc
agccccgaaaacggcaccgcggccgaagaactcgccgcagcttacgacagcgatgcgatg
gagatcggtttcaacgcccgttatctcagcgatatcctcgggcaggtcgatggcgacaat
gtcgaactccacctcgccgacgccaacgccccgacgttgatccgcgagagcgagaagagc
ccggcactttatgtgctgatgccgatgcgggtgtaa

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