Sphingopyxis sp. J-6: V6U71_04590
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Entry
V6U71_04590 CDS
T10764
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
spjj Sphingopyxis sp. J-6
Pathway
spjj00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
spjj00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
V6U71_04590 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
spjj01007
]
V6U71_04590 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spjj03016
]
V6U71_04590 (serS)
Enzymes [BR:
spjj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
V6U71_04590 (serS)
Amino acid related enzymes [BR:
spjj01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
V6U71_04590 (serS)
Transfer RNA biogenesis [BR:
spjj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
V6U71_04590 (serS)
Prokaryotic type
V6U71_04590 (serS)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
TMF_TATA_bd
Snf7
Motif
Other DBs
NCBI-ProteinID:
XMG41341
LinkDB
All DBs
Position
complement(937482..938756)
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AA seq
424 aa
AA seq
DB search
MHDIRLIRDNPQAFDAGLARRGLEPLSAEILAADASLRALQTDIQSSLARRNEASKLIGQ
AMAKGDKDGAEALKAEVADLKAALPAKEEAEREQLAALHDRLAALPNLPAADVPEGEDEE
GNVEISRWGTPRSFDFAPQEHADFAPALGLDFETAAKMSGARFAFLKGQMARLERALGQY
MIDRQTIEAGYTECASPLMVRDEAAYGTAQLPKFREDLFQTTDGRWLISTSEMSLTNAVR
EEILPEAELPVRMTALTPCFRSEAGSAGRDTRGYIRQHQFWKVELVSITRPEDSDAELER
KTRAAEAILEALELPYRRMLLCAGDMGFGARKTYDLEVWLPGQNAYREISSCSNCGDFQA
RRMNTRFRRDGAKGNEFVHTLNGSGLAVGRTLVAILENYQQADGSVDIPQVLLPYMGGIT
KLTP
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcacgatatccgcctgatccgggataacccgcaagctttcgacgccggtctcgcacgc
cgcggtctcgaacctttgtctgccgaaatcctcgccgccgacgcatcgctgcgcgcgcta
cagaccgatatccagtcgtcgctcgcgcgccgcaacgaagcctcgaagctgatcggccag
gcaatggcaaagggcgacaaggacggcgccgaggcgctgaaggccgaggtcgccgacctc
aaggccgcgcttcccgccaaggaggaggccgagcgcgagcagctcgccgcgctgcacgac
aggcttgccgccctccccaacctgcccgccgccgacgtccccgagggcgaggacgaagag
ggcaatgtcgagatttcgcgctggggaaccccgcgcagcttcgacttcgcgccgcaggaa
catgccgatttcgcgcccgcgctcgggctcgatttcgaaaccgcggcaaagatgtcgggc
gcgcgcttcgccttcctgaagggccagatggcgcggctcgaacgcgcgctcggccaatat
atgatcgaccgccagacgatcgaggccggctataccgaatgcgcgagcccgctgatggtc
cgcgacgaggcggcctatggcaccgcgcagctccccaagttccgcgaggatctgttccag
accaccgacggccgctggctgatctcgacgtcggagatgagcctgaccaatgcggtgcgc
gaggagattttgcccgaagccgagctgcctgtccgcatgaccgcgctcaccccctgcttc
cggtccgaggccgggtcggcggggcgcgacacgcgcggctatatccgccagcaccagttc
tggaaggtcgagcttgtctcgatcacccgccccgaggacagcgacgccgaactcgaacgc
aagacgcgcgccgccgaggcgatcctcgaagcgctcgaactgccgtatcgccggatgctg
ctgtgcgccggcgacatggggttcggcgcgcgcaagacctatgacctcgaagtctggctt
cccggccagaatgcctatcgcgagatttcgagctgttcgaactgcggcgatttccaggca
cggcggatgaacacccgcttccgccgcgacggcgcaaagggcaacgagttcgtccacacg
ctgaacgggtcgggccttgcggtcgggcggacgctggtggcgattctcgaaaattaccag
caggccgatggcagcgtcgacattccgcaggtgctgctgccctatatgggcgggattacg
aagctgacgccctga
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