KEGG   Sphingopyxis sp. J-6: V6U71_05535
Entry
V6U71_05535       CDS       T10764                                 
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
spjj  Sphingopyxis sp. J-6
Pathway
spjj00470  D-Amino acid metabolism
spjj00550  Peptidoglycan biosynthesis
spjj01100  Metabolic pathways
spjj01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:spjj00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    V6U71_05535
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    V6U71_05535
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    V6U71_05535
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:spjj01011]
    V6U71_05535
Enzymes [BR:spjj01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     V6U71_05535
Peptidoglycan biosynthesis and degradation proteins [BR:spjj01011]
 Precursor biosynthesis
  Amino acid ligase
   V6U71_05535
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_3 ATP-grasp_4 Rimk_N
Other DBs
NCBI-ProteinID: XMG41522
LinkDB
Position
1140637..1141563
AA seq 308 aa
MSRGPWHVAVLMGGWSAEREVSLMSGKGVADALESRGHKVTRIDMDRDVALRLAEAKPDV
VFNALHGVPGEDGTVQGMLDLMGLKYTHSGLVTSVIAIDKELTKQALVPHGIPMPTGTMV
DSESLFSIDPLPRPYVLKPVNEGSSVGVAIVKDDSNYGNPIARDAVGPWQEFDRLLAEPF
IKGRELTVAVLADTALAVTELRVKSGFYDYDAKYTDGLTEHVCPADVPEDVAQRMKDLAL
QAHRLLGCKGASRSDFRWDDEHGLAGIFLLEVNTQPGMTPLSLVPEQGRAVGMDYAELVE
RIVGEALS
NT seq 927 nt   +upstreamnt  +downstreamnt
gtgagccggggtccgtggcatgtggctgtcctgatgggcggctggtcggcagagcgcgaa
gtgtcgctgatgagcggcaaaggcgttgccgatgcgctggaatcgcgcggccacaaggtc
acgcggatcgacatggaccgcgatgtcgcgctgcggctcgccgaagcgaagcccgacgtc
gtgttcaatgcgctccacggcgttccgggcgaggacgggacggtgcagggcatgctcgac
ctgatggggctcaaatatacccacagcgggctggtcacctcggtgatcgcgatcgacaag
gaattgacgaagcaggcgctcgtcccgcatggtatcccgatgccgacggggacgatggtc
gacagcgaaagcctcttttcgatcgacccgctgccgcgtccctatgtcctgaaacccgtc
aacgagggctcgtcggtcggcgtcgcgatcgtcaaggacgacagcaattacggtaacccg
atcgcgcgcgatgcggtcgggccctggcaggagttcgaccgcctgctcgccgaacccttc
atcaaggggcgcgaactgaccgtcgcggtgctcgccgataccgcgctggcagtgaccgaa
ctgcgcgtcaagtcgggcttttacgactatgacgccaaatataccgacgggctgactgaa
catgtgtgtcccgccgacgtgcccgaagatgtcgcgcagcggatgaaggatctggcgctg
caggcgcaccgcctgctcggttgcaagggcgcgtcgcgttcggatttccgctgggacgac
gaacatggcctcgcgggtatcttcctgctcgaggtcaacacccagcccggcatgacgccg
ctcagtctggtgcccgaacaggggcgcgccgtcggcatggattatgccgaactcgtcgaa
cgcatcgtgggggaagcgttgtcatga

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