Sphingopyxis sp. J-6: V6U71_06020
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Entry
V6U71_06020 CDS
T10764
Symbol
nirB
Name
(GenBank) nitrite reductase large subunit NirB
KO
K26139
nitrite reductase [NAD(P)H] large subunit [EC:
1.7.1.4
]
Organism
spjj Sphingopyxis sp. J-6
Pathway
spjj00910
Nitrogen metabolism
spjj01100
Metabolic pathways
spjj01120
Microbial metabolism in diverse environments
spjj01310
Nitrogen cycle
Module
spjj_M00531
Assimilatory nitrate reduction, nitrate => ammonia
spjj_M00615
Nitrate assimilation
Brite
KEGG Orthology (KO) [BR:
spjj00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
V6U71_06020 (nirB)
Enzymes [BR:
spjj01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.4 nitrite reductase [NAD(P)H]
V6U71_06020 (nirB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pyr_redox_2
NIR_SIR
Fer2_BFD
Rubredoxin_C
Pyr_redox
NIR_SIR_ferr
DAO
NAD_binding_8
FAD_binding_2
Pyr_redox_3
AlaDh_PNT_C
GIDA
3HCDH_N
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
XMG41615
LinkDB
All DBs
Position
complement(1245091..1247568)
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AA seq
825 aa
AA seq
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MEHRPLKPDADTREHLVVIGNGMAGCRAVEELLARDPNRYRVTIFGAEPRVNYNRIMLSP
VLAGEKCFDDIVINDAGWYADNGIALIAGDPVAAIDRAARTVTTRSGLVESYDRLLIATG
SDPFIIPVPGKDLPGVIAFRDMDDVDTMLAAADAGGDAVVIGGGLLGLEAAHGLSLRGMK
VTVIHLMPTLMERQLDEAAGWLLKQALEARGQTILTGADTAAIIGTGKVEGVKLKDGTLI
PASLVVMAVGIRPSTQLARDAGLAIGRGIQVDDHMVTSDPAVLAVGECVEHDGQVYGLVA
PLWDMCRSLADGLVEQPTGYRGSVTSTKLKVSGIDVFSAGDFSGGDGCEDIVLRDASRGV
YKRVIVKDDRIVGAVLYGDTVDGNWYFDLLKKQEDVSDLRDLLIFGQAFAAGGGAADPKA
VVAALSDDAEICGCNGVTKGQVVSCIAKGAHSLDAVRGTCKASASCGSCTGLVDNLLALT
LGDDVQSGPKTMCKCTSFGHDDVRREIVAQNMRSIPEVMQKLHWTTPDGCSSCRPALNYY
LLCALPGDYLDDQQSRFVNERLHANIQKDGTYSVVPRMWGGLTNPKELRAIADVVEKYNA
PMVKVTGGQRLDIFGIRKEDLPAVWADLNAAGMVSGHAYGKALRTVKTCVGSEWCRFGTQ
DSTGLGVKLERMSWGSWMPHKFKIAVSGCPRNCAEATIKDFGVVCVDSGYELHVGGNGGI
HVRATDLLCKVATEQEAMDYCAAFIQLYREEARYLERTAPWIERVGLAHIVARIVDDEPG
REALRARFLYSQSFSQDDPWAQRAEGAEAEHHAPMARFTPQEEPA
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggaacaccgccccctcaaacccgacgccgacacgcgcgagcatctggtcgtgatcggc
aacggcatggccggctgccgcgcggtcgaggaactgctcgcgcgcgatccgaaccgctac
cgcgtgacgatctttggcgccgaaccgcgggtcaattacaaccgcatcatgctctccccc
gtcctcgcgggcgagaaatgcttcgacgacatcgtgatcaacgatgcgggctggtacgcc
gacaacggcatcgcgctgatcgcgggcgaccccgtcgcggcgatcgaccgcgccgccagg
acggtgacgacgcgcagcgggctcgtcgaaagctatgaccggctgctgatcgccaccggc
tccgatcccttcatcatcccggttcccggcaaggatctgcccggcgtcatcgccttccgc
gacatggacgacgtcgatacgatgctcgccgccgcggatgccggcggcgatgccgtcgtg
atcggcggcggcctgctcgggctcgaggcggcgcacggcctcagcttgcgcggcatgaag
gtcaccgtcatccacctgatgccgaccttgatggagcgccagctcgacgaggccgccggc
tggctgctcaaacaggcgctcgaagcgcgcggccagacgatcctgaccggcgccgacacc
gctgcgatcattggcaccggcaaggtcgagggcgtgaaactcaaggacgggacgctgatc
cccgccagcctggtcgtcatggcggtcggtatccgcccgtcgacccaactcgcccgcgac
gcgggcctcgcgatcgggcgcggcatacaggtcgacgaccatatggtcaccagcgacccc
gcggtgctcgcggtcggcgaatgcgtcgaacatgacgggcaggtctatggcctcgtcgcg
ccgctgtgggacatgtgccgcagcctcgccgacggcctcgtcgaacagccgaccggctat
cgcggatcggtgacctcgaccaagctcaaagtgtcgggcatcgacgtcttttcggcgggc
gatttttcgggcggcgacgggtgcgaggatatcgtgctgcgtgacgccagccgcggcgtc
tacaaacgcgtcatcgtcaaggacgaccgcatcgtcggcgccgtcctctacggcgatacc
gtcgacggcaattggtatttcgacctgctcaagaagcaggaggacgtctccgacctccgc
gacctgctcatcttcggccaggccttcgccgcgggaggcggcgcggcggaccctaaggcg
gtcgttgcggcgctttccgacgacgcggaaatctgcggctgcaacggcgttaccaagggc
caggtcgtctcgtgcatcgccaagggcgcgcacagtctcgacgccgtgcgcggcacctgc
aaggcgtcggcgagctgcggcagctgcaccggcctcgtcgacaatctgctcgcgctgacc
ctcggcgacgatgtccagagcgggcccaagacgatgtgcaaatgcaccagcttcggccac
gacgacgtgcggcgcgagatcgtcgcgcagaatatgcgctcgatccccgaggtgatgcag
aagctgcactggacgacccccgatggctgctcctcgtgccgcccggcgctcaattactat
ctgctctgcgcgctgcccggcgactatctcgacgaccagcagagccgtttcgtcaacgag
cgcctccacgccaatatccagaaggacggcacttattcggtcgtcccgcggatgtggggc
gggctcaccaaccccaaagagctgcgcgcgatcgccgacgtcgtcgaaaagtacaacgcg
ccgatggtcaaggtgaccggcggccagcggctcgacatcttcgggatcaggaaggaggat
ctgcccgcggtgtgggccgatctcaatgccgcaggcatggtttcgggccacgcctatggc
aaggcgctgcgcacggtgaagacctgcgtcgggtccgaatggtgccgcttcggcacgcag
gattcgaccgggctcggcgtcaagctcgaacggatgagctggggcagctggatgccgcac
aaattcaagatcgcggtgtcgggctgcccgcgcaactgcgccgaggcgacgatcaaggat
ttcggcgtcgtctgcgtcgacagcggctacgagctccatgtcggcggcaacggcggcatc
cacgtccgcgccaccgatctgctctgcaaggtcgcgaccgagcaggaggcaatggattat
tgcgccgccttcatccagctctaccgcgaagaagcgcgctatctcgagcgcaccgcgccg
tggatcgagcgcgtcgggctcgcgcatatcgtcgcgcgcatcgtcgacgacgaaccgggc
cgcgaggcgctgcgcgcccgcttcctctattcgcaaagcttcagccaggacgatccctgg
gcgcagcgcgccgagggcgccgaggccgaacatcatgcgccgatggcgcgcttcaccccg
caggaggaaccggcatga
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