Sphingopyxis sp. J-6: V6U71_06605
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Entry
V6U71_06605 CDS
T10764
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
spjj Sphingopyxis sp. J-6
Brite
KEGG Orthology (KO) [BR:
spjj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spjj03021
]
V6U71_06605 (rpoH)
Transcription machinery [BR:
spjj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
V6U71_06605 (rpoH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
wHTH-HSP90_Na-assoc
Motif
Other DBs
NCBI-ProteinID:
XMG41732
LinkDB
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Position
complement(1372464..1373366)
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AA seq
300 aa
AA seq
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MANKSNVPATVPALGGEASLNRYLAEIRKFPLLTPEQEYMLAKRFQEHGDNEAAAQLVTS
HLRLVAKIAMGYRGYGLPVSELISEGNIGLMQGVKKFDPERGFRLATYAMWWIRASIQEF
ILRSWSLVKMGTTAAQKKLFFNLRRMKNNLEAFEDGDLSPEHVAKIATDLGVTEDEVVSM
NRRMAMGGDTSLNVPMGEDGDSQWQDLLGDEGPLQDERVAEAQERDVRHSLLSEALETLN
ERERHILTERRLTDDPKTLEDLSQVYDVSRERVRQIEVRAFEKLQKAMLKLAGDRRLVGA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggctaataaaagcaatgttccggccacggtgcccgcgctcggcggtgaggcgagcctg
aaccgctatctggccgaaatccgcaaatttccgctgctgacgcccgagcaggaatatatg
ctcgcaaagcgtttccaggagcatggcgacaatgaagctgccgcgcagctcgtcacctcg
cacctccgcctcgtcgcgaagatcgcgatgggttaccgcggctatggcctgccggtcagc
gaattgatcagcgaaggcaatatcggcctgatgcagggcgtgaagaagttcgaccccgaa
cgcggcttccgcctcgccacctatgcgatgtggtggatccgcgcctcgatccaggaattc
atcctgcggtcgtggagcctcgtcaagatgggcaccaccgcggcgcagaagaagctgttc
ttcaacctccgccggatgaagaacaacctcgaagcgttcgaggatggcgacctgagcccc
gaacatgtcgcaaagatcgcaaccgacctcggcgtgaccgaggacgaggtggtcagtatg
aaccgccgcatggcgatgggcggcgacacctcgctgaacgtcccgatgggcgaggacggc
gacagccagtggcaggacctgctcggcgacgaaggcccattgcaggacgaacgcgtcgcc
gaagcacaggaacgcgacgtgcgccattcgctgctcagcgaagcgctcgaaacgctgaac
gagcgcgaacgccacatcctgaccgaacgccgcctgaccgacgatccgaaaacgctcgag
gatctgagccaggtctatgacgtcagccgcgaacgcgtccgccagatcgaagtgcgcgcc
ttcgaaaaactgcaaaaggcgatgctcaagctcgcgggcgaccgccggctggtgggcgcc
tga
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