Sphingopyxis sp. J-6: V6U71_07525
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Entry
V6U71_07525 CDS
T10764
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
spjj Sphingopyxis sp. J-6
Brite
KEGG Orthology (KO) [BR:
spjj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spjj02000
]
V6U71_07525
Transporters [BR:
spjj02000
]
Other transporters
Pores ion channels [TC:
1
]
V6U71_07525
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
DUF2490
Motif
Other DBs
NCBI-ProteinID:
XMG41908
LinkDB
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Position
1570766..1573216
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AA seq
816 aa
AA seq
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MKAIRFFLLAGTSLAIAAPAFAAEAAADGANAVSAEGEIIVTAQRRAESINDVGMAIQAV
DGDTLEALRVTDVRDLTAVAPSFTVSQSYQGVPTYTLRGIGFNTINLSSTSTVGTYVDEV
AYAYPIMNTGPVMDLERVEVLKGPQGTLYGRNTTAGLINFITGKPTDSFEGSIKADLGNY
QTYNIGGHISGPLGEGIAARIAFRSENRDKGWQVSNSRGERQGKVDKLGIRGSLAIDPAP
GTHFDLSVTWWRNKSDTVVGQGIGFTPATNPATGTSNSRFFNAPGLADYLANNFPTKATQ
ADWAPSAQRSADIGTGLGLDGPLAEDNRFWGLKLRWDQDLGDTMKLVSLTSYNDFKRNAL
SDWSGAPFEILLQNTVGRIKSFAQDIHIEGESGPATWLVGAYYANDRIIDSNRTMLGQNA
NVGLIRAAGAPLLASPIFNSGGYTLAELQQAFRTYEDFGRIRTKTWSIFANADWELSDQF
KLTAGVRYTEDKQHYNGCSRDFNGNMLPNVNVVNRALYLQTYGVLAAPIAEGQCNTFDPV
TGTFGEVRSVLDENNVAWRGALNWSPNSDTLVYASVSRGYKSGTTPINAANLARQNAPVT
QEKLTAYEIGLKATLADRAVQANLSAFYYDYADKQISTYFADPIYTALSRLDNVPKSKAY
GVEGELTVRPATGLTLSANALWLKTRIDDYNGTNAAGQPENFDGAEFIYSPEFQGSLTLA
YDTPVSDTLNLTGAVSARYQSKSNTIFEDLDLYKVKAYGTVNASLGVKSESGWSVSLWAK
NLFNSYYWSAVASNANVVVRFPNPPRTYGLTLGFDF
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcaatccggtttttcctgctcgcgggcaccagcctcgcgatcgccgcgcccgct
tttgcggccgaagcggcggccgatggcgccaatgccgtatcggcagagggcgagatcatc
gtcacggcgcagcgccgcgcggaatcgatcaacgacgtcggcatggcgatccaggcggtc
gacggcgacacgctcgaagccttgcgcgtcaccgatgtgcgcgacctgaccgccgtcgcg
ccgagctttaccgtgtcgcaaagctatcagggcgtcccgacctatacgttgcgcgggatc
ggcttcaacacgatcaacctctcgtcgacttcgacggtcggcacttatgtcgacgaagtc
gcctacgcctatccgatcatgaacaccggcccggtgatggatctcgagcgggtcgaggtg
ctgaaagggccgcagggcacgctctatggccgcaacacgaccgccggcctgatcaatttc
attaccggcaagccgaccgacagcttcgagggcagcatcaaggccgacctcggcaattac
cagacatataatatcggcggccatatctccggcccgctcggcgaggggatcgcggcgcgg
atcgcgttccgtagcgagaacagggacaagggctggcaggtcagcaacagccgcggcgaa
cggcagggcaaggtcgacaagctcggcattcgcggttcgctggcgatcgatcccgccccg
ggcacgcatttcgacctgtcggtgacctggtggcggaacaagtccgacaccgtggtcggg
caggggatcggctttacccccgccaccaacccggcaacggggacgagcaattcgcgcttc
ttcaacgcgccgggactcgccgattatctggcgaataatttcccgaccaaggcgacgcag
gccgactgggcgccctctgcgcagcgctcggccgatatcggcaccgggctcgggctcgac
gggccgctcgccgaagacaatcgcttctgggggctgaagctgcgctgggatcaggatctc
ggcgacacgatgaaactcgtctcgctgaccagctataacgacttcaagcgcaacgcactt
tccgactggagcggcgcgccgttcgaaatcctgctccagaacaccgtcggccggatcaag
agctttgcgcaggatattcatatcgaaggcgaaagcggccccgcgacctggctcgtcggc
gcctattacgccaacgaccggatcatcgactccaaccggacgatgctgggccagaacgcc
aatgtcgggctgatccgcgccgcgggcgcgccgttgctcgcgagcccgatcttcaactcg
gggggctacacgctggccgagctccagcaggctttccggacctatgaagatttcggccgg
atccggacgaagacatggagcatctttgccaacgccgactgggagctttcagaccagttc
aagctgaccgcgggggttcgctataccgaggacaagcagcactataacggctgttcgcgc
gactttaacggcaacatgctgcccaacgtcaatgtcgtgaaccgcgcgctctatctccag
acctatggcgtgctggcggcgccgattgcggaggggcagtgcaacaccttcgatccggtg
accggtaccttcggcgaagtgcgttcggtgctcgacgagaataatgtcgcgtggcgcggc
gcgctcaactggtcgccgaacagcgatacgctggtctatgcgtcggtgtcgcgcggctat
aaatcggggacgacgccgatcaacgcggcgaacctcgcgcgccagaatgcgccggtgacg
caggaaaagctgacggcttatgaaatcggcctgaaagcgacgctcgccgaccgcgcggtg
caggcgaacctctcggccttctactacgactacgccgacaagcagatcagcacctatttc
gccgatccgatctacacggcgctgtcgcggctcgacaatgtgccgaagtcgaaagcctat
ggcgtcgagggcgaactcaccgtccgacccgcgaccggcctgacgctgtccgccaacgcg
ctgtggctgaaaacgcggatcgacgattacaacggcaccaacgccgccgggcagccggag
aatttcgacggcgccgaattcatctacagccccgaattccagggcagcctgacgctcgcc
tatgacacgccggtcagcgatacgctcaacctgaccggcgcggtcagcgcacgctaccag
agcaagtcgaacacgatcttcgaggatctcgatctctacaaggtcaaagcctatggcacc
gtcaatgccagccttggcgtgaagagcgaaagcggctggtcggtgtcgctgtgggcgaag
aatctgttcaacagctattactggtcggcggtcgccagcaacgccaacgtcgtggtacgc
ttcccgaacccgccgcggacctatggtctgacgctgggcttcgatttctga
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