Sphingopyxis sp. J-6: V6U71_07945
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Entry
V6U71_07945 CDS
T10764
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
spjj Sphingopyxis sp. J-6
Brite
KEGG Orthology (KO) [BR:
spjj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spjj03032
]
V6U71_07945
03036 Chromosome and associated proteins [BR:
spjj03036
]
V6U71_07945
03400 DNA repair and recombination proteins [BR:
spjj03400
]
V6U71_07945
DNA replication proteins [BR:
spjj03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
V6U71_07945
Chromosome and associated proteins [BR:
spjj03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
V6U71_07945
DNA repair and recombination proteins [BR:
spjj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
V6U71_07945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
XMG41987
LinkDB
All DBs
Position
complement(1666824..1667102)
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AA seq
92 aa
AA seq
DB search
MIRSELVQKIASENSDLRLEEVERIVDAFFDSIVDQLASGGRVELRGFGAFSTRSRESRT
GRNPRTGAPVAVKAKAVPYFKPGKEMRERLND
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgatccggtcggaactggttcaaaagatcgcaagcgaaaacagcgacctgcgccttgag
gaggtcgagcgcatcgtcgatgcctttttcgactcgatcgtcgatcaactcgcctctggc
ggtcgcgtcgaactgcgcggattcggggcgttttcgacccgcagccgcgaatcgcgcacc
ggccgcaacccgcgcacgggcgcacccgtcgcggtgaaggccaaggcggtgccctatttc
aagcccggcaaggaaatgcgcgagcggctgaacgactga
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