Sphingopyxis sp. J-6: V6U71_08270
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Entry
V6U71_08270 CDS
T10764
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
spjj Sphingopyxis sp. J-6
Pathway
spjj02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
spjj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
V6U71_08270
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spjj02000
]
V6U71_08270
Transporters [BR:
spjj02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
V6U71_08270
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
Lipoprotein_8
Motif
Other DBs
NCBI-ProteinID:
XMG42046
LinkDB
All DBs
Position
complement(1730862..1731968)
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AA seq
368 aa
AA seq
DB search
MDLNELLKATRGRRSLLQALGVAAVGISFGGMAACSKGEGKKLANGEEAKLNFYNWDTYI
GETTLDDFKETSGVDVTMDLFDSNDTLFAKFKAGNPGYDVIVPSNDFVERMARADMLQPL
DHAQIPNIKNIEPSFMNVDYDPGRKFSLPYTWLVLGIGYRKSKVKTKPDSWKVLFDSPEY
KDRIAWLSEAGDMFRLYGKYLGKSVNALTPADIESISAMMIKQKPYVKKFHEDDGQDLLL
KGDCDVVLEYNGDIAQAMVEDDDLDFIVPKEGSQLNSDTLCIPKGAPHPKNAHAFINYLL
DGEVDKKITETILFPTPNSAAKALMPESYRNNPVIFPPADVLAKCEYAKFNEKLQPLYEE
AFTKVRAA
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggatctgaacgaactgctcaaagccactcggggtcgtcgctcactgctgcaggcgctg
ggggtcgcagcggtcgggatcagcttcggcggcatggccgcctgcagcaagggcgaaggc
aaaaagctcgcgaacggcgaagaagccaagctaaacttctacaactgggacacctatatc
ggcgagacgacactcgacgatttcaaggaaaccagcggcgtcgatgtcaccatggacctt
ttcgacagcaacgacacgctgttcgcgaagttcaaggcgggcaaccccggctatgacgtg
atcgtgccgtcgaacgactttgtcgagcggatggcgcgcgccgacatgctccagccgctc
gaccatgcgcagatcccgaacatcaagaatatcgaaccgagcttcatgaacgtcgattat
gatccgggtcgcaaattctcgctgccctatacctggctcgtgctcggcatcggctatcgc
aagtcgaaggtgaagacgaagcccgacagctggaaagtgctgttcgacagtcccgaatat
aaggatcgcatcgcctggctgtcggaggccggcgatatgttccgcctctatggcaaatat
ctcggcaagtcggtcaacgcgctgaccccggcggatatcgagtcgatctcggcgatgatg
atcaagcagaagccctatgtgaagaaattccacgaggacgacgggcaggatctgctgctc
aagggcgactgcgacgtcgtgctcgaatataatggcgatatcgcacaggcgatggtcgag
gacgacgacctcgacttcatcgtgcccaaggaaggcagccagctcaattcggatacgctc
tgcatcccgaagggcgccccgcatccgaagaacgcccacgcattcatcaactatctgctc
gatggcgaggtcgacaagaagatcaccgaaacgatcctcttcccgaccccgaactcggcg
gcgaaggcgctgatgcccgagagctaccggaacaacccggtcattttcccgccggcggac
gtgctcgcgaaatgcgaatatgcgaagttcaacgagaagctgcagccgctgtacgaggaa
gccttcaccaaggtgcgggcagcctga
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