Sphingopyxis sp. J-6: V6U71_08535
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Entry
V6U71_08535 CDS
T10764
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
spjj Sphingopyxis sp. J-6
Brite
KEGG Orthology (KO) [BR:
spjj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spjj03032
]
V6U71_08535 (gyrA)
03400 DNA repair and recombination proteins [BR:
spjj03400
]
V6U71_08535 (gyrA)
Enzymes [BR:
spjj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
V6U71_08535 (gyrA)
DNA replication proteins [BR:
spjj03032
]
Prokaryotic type
DNA Topoisomerases
V6U71_08535 (gyrA)
DNA repair and recombination proteins [BR:
spjj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
V6U71_08535 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
XMG42097
LinkDB
All DBs
Position
complement(1775968..1778682)
Genome browser
AA seq
904 aa
AA seq
DB search
MQPSDDGVSPINIVDEMKTSYLDYAMSVIVSRALPDVRDGLKPVHRRILYAAQEGGFVPG
RPYKKSAKIVGDVMGNYHPHGDSAIYDALARMTQDWSLRVPLIDGQGNFGSMDPDPPASM
RYTEARLAKTAMVLLNDLDKDTVDFQPNYDASRDEPTVLPARFPNLLVNGAGGIAVGMAT
NIPPHNLGEVIDATLAMIDRQLAGGTDITLEELMAIVPGPDFPTGAMMLGQGGARNAYAT
GRGSIMMRSTHIIEEGRNDRQSIVLTSIPFQVGKSGLVEKIAEAARDKRIEGVADIRDES
NREGVRVVIELKRDATAEVVLNQLWRHTPAQSSFPANMLAIRGGRPEMLGLKDILSAFIT
FREEVITRRCKFELAKARDRAHILLGLVVAVSNLDEVVRIIRGSNSPAAAREALLAREWP
IGEIAPYIRLVEAIEGEMEESATYRLSEVQVKAILDLRLHRLTALGRDEIGKELGELATE
IEELLSILADRVKLYGVMREELVAVRDEFATPRKTLVAPAADGIDDEDLIEREEMVVTVT
LDGYIKRTPLETFRAQRRGGKGRAGMATKDEDVVTNLFVTSTHTPVLFFSTAGKVYRMKV
WRLPEGGPATRGRPMINLLPLAQGETISTVLPLPEDEAEWGKLHVMFATAKGNVRRNSMD
AFTNVPSNGKIAMKFEGEDEDDRLIGVALLDESDDVLLATRQGKAIRFAGDDVREFQSRN
STGVRGMRLADGDEVISLSILHKVGTTSDEREAYLRAAPWKDNENEPTLPADRMEELAAR
EEFILTVCANGYGKLSSAYEYRRTGRGGQGITNIDNIGRNGPVVASFPATKEHQLMLVTD
QAKLIRMGLDSMRVIGRGSAGVRLFDVAKDEHVVSAALIEEGDEEEGEAAETAAEASEAE
ASPE
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccgtccgacgacggcgtttcgccgatcaatatcgtcgacgaaatgaagacttca
tacctcgattacgcgatgagcgtgatcgtcagccgcgcgctgcccgacgtgcgcgacggg
ctgaagccggtgcaccgccgcatcctctacgcggcgcaggaaggcggcttcgttccgggc
cgtccgtacaagaaatcggccaagatcgtcggcgacgtgatgggtaactatcacccgcat
ggcgacagcgcgatctacgacgcactcgcacgcatgacgcaggactggtcgctgcgcgtt
ccgctcatcgacggtcagggcaatttcggctcgatggaccccgatccgccggcctcgatg
cgatataccgaagcgcggctcgcgaagaccgcgatggtgctgctgaacgacctcgacaag
gacaccgtcgacttccagcccaactatgacgcgagccgcgacgagccgaccgtactcccg
gcgcgtttcccgaacctgctcgtcaacggtgcgggcggcatcgcggtcggcatggcgacc
aacatcccgccgcacaatttgggcgaagtgatcgacgcgacgctcgcaatgatcgaccgc
cagctagcgggcggcaccgacatcacgctcgaggagctgatggcgatcgtccccggtccc
gacttcccgaccggcgcgatgatgctcggccagggcggcgcgcgcaacgcttacgccacc
ggccgcggctctatcatgatgcgctcgacgcacatcatcgaggaaggtaggaacgaccgc
cagtcgattgttctgacgtcgattcccttccaggtcggcaagtcgggcctggtcgagaag
atcgccgaggcggcgcgcgacaagcgcatcgagggtgtcgccgacatccgcgacgaatcg
aaccgcgagggcgtccgcgtcgtcatcgaattgaaacgcgacgccaccgccgaggtcgtg
ctcaaccagctctggcgccataccccggcgcagtcgagcttccccgccaacatgctcgcg
atccgcggcggccgccccgaaatgctcgggctgaaggatattctttcggccttcatcact
ttccgcgaggaagtgatcacccgccgctgcaagttcgaactcgcgaaagcgcgcgaccgc
gcacatatcttgctcggtctcgtcgtcgcggtcagcaatctcgacgaagtcgtccgcatc
atccgtggatcgaactcgcccgcggcggcccgcgaagcgctgctcgcacgcgaatggccg
atcggcgaaatcgccccctacatccgcctcgtcgaggcgatcgagggcgagatggaggaa
agcgcgacctatcgcctgtccgaagtgcaggtgaaggcaatcctcgacctccgcctccac
cgcctcaccgcgcttggccgcgatgaaattggtaaggaactcggtgagttggcgaccgag
attgaggaactgctttcgatcctcgccgaccgcgtcaaactctatggcgtgatgcgcgaa
gagctggtcgcggtgcgcgacgaatttgcaacgccgcgcaagacgctcgtcgcccccgcc
gccgacggcatcgatgacgaggatctgatcgaacgcgaggagatggtcgtcaccgttacc
ctcgacggctatatcaaacgcaccccgctcgaaaccttccgtgcccagcgccgcggcggc
aagggccgcgccggcatggcgaccaaggacgaggatgtggtcaccaacctgttcgtcacc
tcgacgcacacgccggtgctgttcttctcgaccgcgggcaaggtctatcgcatgaaggtg
tggcgcctgcccgaaggcgggcccgcgacgcgcggccgcccgatgatcaacctgctgccg
ctcgcgcagggcgaaaccatctcgaccgtgctcccgctacccgaggacgaggcagaatgg
ggcaagctgcacgtcatgtttgcaaccgcaaagggcaatgtgcgtcgtaacagcatggac
gccttcaccaacgtgccctcgaacggcaagatcgcgatgaagttcgagggcgaggacgag
gacgaccggctgatcggcgtcgctttgctcgacgaaagcgacgatgtcctgctcgcgacg
cgacagggcaaggcgatccgcttcgcaggcgacgatgtccgcgagttccagagccgcaat
tcgaccggtgtgcgcggcatgcgcctcgccgacggcgacgaggtgatctcgctctcgatc
ctccacaaggtcggcacgacaagcgacgagcgagaagcctatctccgcgccgcgccgtgg
aaggataatgagaacgaaccgacgctgcccgccgaccgcatggaagagctcgccgcccgc
gaggagttcatccttaccgtctgcgccaacggctatggcaagctgtcgtcggcctatgaa
tatcgccgcaccggccgcggcggtcaggggatcaccaacatcgacaatatcggccgcaac
ggcccggtcgtcgccagtttcccggccaccaaggaacatcagctgatgctggtgaccgat
caggcgaagctgatccgcatggggctcgattcgatgcgcgtcatcggccgtggcagcgcg
ggcgtgcgcctgttcgatgtcgccaaggacgaacatgtcgtctcggcggcgctcatcgag
gaaggcgacgaggaggaaggcgaagccgccgaaaccgcggccgaagcctccgaagcggaa
gcatcgcccgaatga
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