Sphingopyxis sp. J-6: V6U71_09320
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Entry
V6U71_09320 CDS
T10764
Name
(GenBank) class I adenylate-forming enzyme family protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
spjj Sphingopyxis sp. J-6
Pathway
spjj00061
Fatty acid biosynthesis
spjj00071
Fatty acid degradation
spjj01100
Metabolic pathways
spjj01212
Fatty acid metabolism
spjj02024
Quorum sensing
spjj04146
Peroxisome
Module
spjj_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
spjj00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
V6U71_09320
00071 Fatty acid degradation
V6U71_09320
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
V6U71_09320
09145 Cellular community - prokaryotes
02024 Quorum sensing
V6U71_09320
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
spjj01004
]
V6U71_09320
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spjj04147
]
V6U71_09320
Enzymes [BR:
spjj01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
V6U71_09320
Lipid biosynthesis proteins [BR:
spjj01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
V6U71_09320
Exosome [BR:
spjj04147
]
Exosomal proteins
Exosomal proteins of breast milk
V6U71_09320
Exosomal proteins of breast cancer cells
V6U71_09320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF7964
Motif
Other DBs
NCBI-ProteinID:
XMG42249
LinkDB
All DBs
Position
1947212..1948711
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AA seq
499 aa
AA seq
DB search
MALMTEKLRAIMALDPDRTQIDFGGTDYSWQQIAENVRAIEAALDAMGLPEDARVGVMLR
NRPGHVAAIVAVLSTDRCLVTLNPILPDPKLFADVENLGLPVIIADATDLARPGLGEALA
RAGSAVIEIDPFLGGVRVVQPEVRTRIQTSPGVAIEMLTSGTTGTPKRVPLSRDAFDASF
RGFTKYERGRSFDDPPRLNSGCTMVVNPLTHIGGIYGCIGALAAGRRIALLEKFSVDAWV
SAVRRNRPAVASAVPSAVRMLLDADVDPADLTSLKSLITGTAPLAPDLVDAFMAKYGIPI
CSNYGATEFAGAIAGWTIDDFRRLWPEKRGAVGRVHADIEARIVDAETGAILPHGAEGLL
EIKGQQLGNDLKWLRTTDRAVLDEDCFLFIKGRADNAIIRGGFKIHPDDVVTALNDHPAI
REAAVVGVPDERLGAVPAAAIILKDGASTPETDDLKAWLKDRLIAYQVPVHIRIVPDFPR
TPSMKPSAPGLRALFAGES
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgatgaccgaaaaattgcgcgcgatcatggcgctcgatcccgaccggacgcag
atcgatttcggcgggacggattatagctggcagcagatcgccgagaatgtccgcgcgatc
gaggccgcgctcgatgcgatgggcctgcccgaggatgcgcgcgtcggcgtgatgctgcgc
aaccgccccggtcatgttgcggcgatcgtcgcggtgctctcgaccgatcgctgccttgtg
acgctcaatccgatcctgcccgacccaaagctgttcgccgacgtcgaaaatctcggcctg
cccgtgatcatcgccgatgccaccgacctcgcgcgcccgggtctcggcgaagcgctcgcg
cgcgccggttcggcagtgatcgaaatcgacccgttcctcggcggcgtccgcgtcgtgcag
cccgaggtccgcacccggatccagacctcgcccggcgtcgcgatcgagatgctcaccagc
ggcactaccgggacgcccaagcgcgtgccgctcagccgcgatgccttcgacgccagcttt
cgcggtttcaccaaatatgagcgcgggcgcagcttcgacgatccgccacggctcaattcg
ggctgcacgatggtggtcaatccactcacccatatcggcgggatctacggctgcatcggc
gcgctcgcggcggggcggcggatcgcgttgctcgaaaaattcagcgtcgacgcatgggtg
tcggcggtgcgccgcaaccgtcccgcggtcgcgtccgccgttccttcggcggtgcgcatg
ctgctcgacgccgacgtcgatcctgccgacctgaccagcctcaagtcgctgatcaccggc
accgcgccgcttgcgcccgatctcgtcgacgccttcatggccaaatacggcatcccgatc
tgcagcaattatggcgcgaccgaatttgccggcgcgatcgccggctggacgatcgacgat
tttcgaaggctctggcctgaaaagcgcggcgcggtcggccgcgtccacgccgatatcgag
gcgcgtatcgtcgatgccgaaaccggcgcgattctgccgcatggagccgaaggtctgctt
gagatcaagggtcagcagcttggcaacgaccttaaatggctgcgcaccaccgaccgcgcg
gtgctcgacgaagactgcttcctcttcatcaagggccgcgccgacaatgcgatcatccgc
ggcggtttcaagatccatcccgacgatgtcgtgactgcgctcaacgaccatcccgcgatc
cgcgaggccgcagtcgtcggcgtgcccgacgagcgcctcggcgctgttcccgccgccgcg
atcatcctcaaggacggggcttccacgcccgagaccgacgacctcaaggcttggctcaaa
gaccggctgatcgcctatcaggtcccggttcatatccgcatcgttcccgacttcccgcgc
accccgtcgatgaaaccctcggcgcccgggctgcgcgcgctatttgcaggagagagctga
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