Sphingopyxis sp. J-6: V6U71_10025
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Entry
V6U71_10025 CDS
T10764
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
Organism
spjj Sphingopyxis sp. J-6
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GFIT
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NCBI-ProteinID:
XMG42382
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Position
2089878..2093087
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AA seq
1069 aa
AA seq
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MRKILLASTCLAAVSATPALAETTITTATTAPVRTSTVKSGTPDDMKITSAGSVKPTSGT
AVTIDSNHKVVNEGTIQITNSDNARGIFANAGTVGSITNSASGKIIIDESYAPTDIDKDG
DIDGPFAVGSNRVGIATGGAFTGNIVNSGTITIEGNDSAGIRLGGPLTGNFTNDGTISVL
GDRALGVGLQDVTGNVRLAGTISAQGLDAVAARLSGDITGALVVQGTVVATGYRTTTAPA
DPSKLDADDLLIGGPALSIEGDVTGGIVLAVPPKDNNKDDKDEDKDGIEDAKEGSAAVSS
FGSAPALRIGAANRDVTIGAVNGTGTGFGLIIDGSVQGNGLYAGKAGNAIQIGGMGGNVT
IAGGIGIGGTVTANSKDVAATGIRMGSGSTTPEIRVAGKVEATSGGNSANAIATGILVEA
GSDVALIRNSGTIAAKTGGDNGTARAIVDLSGNVDTVENSGAISASGAAAASGRNIAIDL
SANTGGATVKQTAVASGVTAPSIVGDVRFGGGNDVFDIADGSVKGDTFFGAGTNRLALSG
DGTYDGTARFGSGADAMTLAGTSKFSGTADFGGGADTLSIGGTSIFSGRLQNSGGLAVSV
SGGAFDVVGAATISSLSITDKGVLGVTLDTGSTGTALQVTGNASFGAESTLALKLSSIEN
AEGEHIVLTAGSLTGASNLTTSQTLLPFLYKGTLTSNATQLIVDVSRKSTTELGLNRSEA
SAFNAVIDALGGDEDIEDVFLDIVDGGQFRNQLQQMLPEHEGGVFETVTSGSRALSRYLQ
DPNAPFQDEGKWGYWVNQAVWGTSKSLGNTSSYDVSGWGISMGAEIESDVGNFGASIAYL
KGKDGNGSNDNEVSTSQFEGALHWRLRSDHLMANARISGAPIKMKGTRIFRAEAGAEDIE
KTIRGKWDGTLWSASGSVAYDAVTNGGFSIRPVVAVDYYKLTEKGYQETGGGDSLDLKVL
GRDSDELAVSGTVAVGFDFGGRDEYDGWTRFEIEGGRRQIVGGSLGATTASFKDGTPFTL
VPDDRTSGWVGRLRGIAGNSAFQVGGEFSAEEQQSHMGWSVRASLRVGL
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaagatcctgctagcgtccacctgcctggcggcggtgtcggccacccccgccctc
gccgaaaccaccatcaccaccgcgaccaccgcacccgtccgcacctcgacggtcaagtcg
ggcacccccgacgatatgaagattacctcggccggatcggtgaagccgaccagcggcacc
gcggtgacgatcgacagcaatcacaaggtggtgaacgaaggcacgatccagatcaccaat
tcggacaatgcgcggggcatcttcgccaatgccggcaccgtcggttcgatcaccaatagc
gcgtcgggcaagatcatcatcgacgaaagctatgcgccgaccgacatcgacaaggacggc
gacatcgacggcccctttgcggtcggcagcaatcgcgtcggcatcgcgaccggcggcgcc
ttcaccggcaatatcgtcaattcgggcacgatcacgatcgagggcaatgattcggcgggt
atccgcctcggcggcccgctgaccggcaatttcaccaacgacggcaccatctcggtcctc
ggcgaccgtgcgctcggcgtcggacttcaggacgtcaccggcaacgtccgcctcgcgggc
acgatcagcgcgcaggggctcgacgccgtcgcggcacggctttccggcgacatcaccggc
gcgctcgtcgtccagggcaccgtcgtcgcaaccggctatcgcaccacgaccgctcccgcg
gacccgtcgaagctcgacgccgacgacctgctgatcggcggcccggcgctgtcgatcgaa
ggcgatgtgacgggcggcatcgtcctcgccgtaccgccaaaggacaataacaaggacgac
aaggacgaggacaaggacggtatcgaggacgcaaaggaaggctcggcggcggtcagttcg
ttcggctcggcgccggcgctgcgcatcggcgccgcgaaccgcgacgtcaccatcggcgcg
gtcaatggcaccggcaccggtttcggcctgatcatcgacggttcggtgcagggcaacggg
ctgtacgcgggcaaggcaggcaatgcgatccagatcggcggcatgggcggcaacgtcacc
atcgccggcggcatcggcatcggcggcaccgtcacagcgaattcaaaggatgttgcggca
accggcatccgcatgggcagcggctcgactacccccgaaatccgcgtcgccggcaaggtc
gaggcgacgagcggcggcaacagcgccaatgcgatcgcgaccggcatcctcgtcgaagcg
ggcagcgatgtcgccctgatccgcaacagcggcacgatcgcggcgaagaccggcggcgac
aacggcaccgcgcgcgccatcgtcgatctgtcgggcaacgtcgatacggtcgagaacagc
ggcgcgatcagcgccagcggcgcggcggcagcgtcgggccggaatatcgcgatcgacctg
tcggcgaataccggcggcgcgacggtcaagcagaccgcggtcgcatcgggcgtcaccgcg
ccgagcatcgtcggcgacgtgcgcttcggcggcggcaacgatgtgttcgacatcgccgat
ggctcggtcaagggcgacaccttcttcggggcaggcaccaaccgcctcgcattgtcgggc
gacgggacctatgacggcaccgcccgcttcggcagcggcgccgacgccatgacgctcgcc
gggacctcgaaattcagcggtaccgccgatttcggcggcggcgccgacacgctgagcatc
ggcggcacctcgatcttctcgggtcgcctgcaaaattcgggcgggctggcggtcagcgtc
agcggcggcgcgttcgacgtcgtcggcgcggcgaccatctcgtcgctgtcgatcaccgac
aagggtgtgctgggcgtgacgctcgacactggcagcaccggcaccgcgttgcaggttacc
ggcaacgccagcttcggcgccgaatcgacgctggcgctcaaactgtcgagcatcgagaat
gccgagggcgagcatatcgtcctgaccgcaggctcgctgaccggcgccagcaatctgacg
acgtcgcagacgttgctgccgttcctctacaagggcacgctgacctcgaacgcgacgcag
ctcatcgtcgacgtctcgcgcaagagcacgaccgagcttggcctcaatcgttccgaagcg
agcgcgttcaacgcggtgatcgacgcactcggcggcgacgaagacatcgaggatgtgttc
ctcgacatcgtcgacggcggccagttccgcaaccagttgcagcagatgcttcccgaacat
gaaggcggcgtcttcgaaaccgtcacctcgggctcgcgcgcgctgtcgcgctacctgcag
gacccgaacgcaccgttccaggacgaaggcaaatggggatattgggtcaaccaggctgtc
tggggcacctcgaagagcctcggtaacacctcgagctacgatgtcagcggctggggcatt
tcgatgggtgcggagatcgagagcgatgtcggcaacttcggcgcgtcgatcgcttacctc
aagggcaaggacggcaacggcagcaacgacaatgaagtcagcaccagccagttcgaaggc
gcgctgcactggcgcctgcgctcggaccacctgatggcgaatgcccgcatttcgggggcg
ccgatcaaaatgaagggcacgcgcattttccgcgccgaagccggggccgaggacatcgaa
aagacgatccgcggcaagtgggacggcacgctttggtccgcctcgggttcggtcgcctat
gacgcggtcacgaacggcggcttctcgatccgcccggtcgtcgcggtcgattattacaag
ctgaccgagaagggctatcaggaaaccggcggcggcgactcgctcgacctcaaggtcctc
ggccgcgacagcgacgaactggccgtgtcgggcaccgtcgccgtcggcttcgacttcggc
ggccgcgacgaatatgacggctggacgcgcttcgaaatcgagggcggccgccgtcagatc
gtcgggggttcgctcggcgcgaccaccgcgtcgttcaaggacggcacccccttcactctc
gtccccgacgaccgcaccagcggctgggtgggccgcctgcgcggcatcgccggcaactcg
gcgttccaggtcgggggcgagttctccgcggaagaacagcagagccatatgggctggtct
gtccgcgccagcttgcgggtcggtctctaa
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