Sphingopyxis sp. J-6: V6U71_11015
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Entry
V6U71_11015 CDS
T10764
Name
(GenBank) diguanylate cyclase
Organism
spjj Sphingopyxis sp. J-6
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Gene cluster
GFIT
Motif
Pfam:
GGDEF
PAS_3
PAS_9
PAS
PAS_4
PAS_8
Cas10-Cmr2_palm2
Motif
Other DBs
NCBI-ProteinID:
XMG42562
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Position
complement(2282032..2283336)
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AA seq
434 aa
AA seq
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MISAEGFRTLLEGVPDGFFVHDETGRLLDLSERCCTDLGYTRDELLGMSILDISGGEAKE
ANLATWQAARAGLSMSYRDVAVHKDGSRFPVEVRLTCQVVDGRKLFLGVALDVAEAESTD
DRTADLRAAHERLAIAAAVGGLGIWDYDIARDAMQCDPQWYHIMGRDPARPIRSIAEFRG
FIHPDDADRATEVHQAASRIADNADNYGIVFRIVRPDGEIRWIRSTASVVADDDGLPVRA
VGFVVDVTDVQHATARLEQQTREDPLTGLANRRRLDEELAKACFHATRTGEPLTLAMIDV
DHFKLYNDAEGHVRGDEALKAVAEILQSVARRPYDLAVRYGGDEYLLMLPGVDEPEPILD
HIIAELAKRQIAHRGSPVGPMLTISCGSVVAPELADVGPVELLKQCDRALYQAKAEGRNR
VHVVRLDERRATTA
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcgccgaaggctttcgaaccctgttggaaggcgtgcccgacggcttttttgtc
catgacgaaaccgggcgcctgctcgatctcagcgagcgttgctgcaccgacctcggctac
acccgcgacgaactgctgggcatgtcgatcctcgatatttcgggcggcgaggcgaaggaa
gccaatctggcgacctggcaggcggcgcgcgccgggctgtcgatgagctatcgcgacgtc
gcggtccacaaggacggatcgcgctttccggtcgaggtccggctgacctgtcaggtcgtc
gacggccgcaagctgttcctcggtgtcgcgctggacgtggccgaggccgagagcaccgac
gatcgcaccgccgacctgcgtgcggcgcacgagcggctggcgatcgcggcggcggtcggc
gggctgggcatctgggactatgatatcgcccgcgacgcgatgcagtgcgacccgcaatgg
tatcatatcatgggccgcgaccccgcgcgcccgatccggtcgattgccgaattccgcggc
ttcatccatcccgacgacgccgaccgcgcgaccgaagtccatcaggcggcgagcaggatc
gccgacaacgcagacaattacggcatcgtcttccgcatcgtccggcccgacggggagata
cgctggatccgttcgaccgcttcggtcgtcgcggacgacgatggcttgccagtgcgggcg
gtcggcttcgtcgtcgacgtcaccgacgtgcagcatgcgacggcgcggctcgaacagcag
acgcgcgaagatccgctgaccggcctcgcaaaccggcggcggctcgacgaagaactggcg
aaggcctgttttcacgcgacgcgaaccggcgagccgctgacgctcgcgatgatcgatgtc
gatcatttcaaactgtacaacgatgccgagggacatgtgcgcggcgacgaggcgctgaag
gcggtggccgaaatattgcagtcggtggcgcggcgcccctatgatctcgcggtgcgctat
ggcggcgacgaatatctgttgatgctgcccggcgtcgacgagcccgaaccgatcctcgac
catatcatcgcggaactcgcgaaacggcagatcgcccaccgggggtcgccggtcggcccg
atgctgacgatcagttgcgggagcgtcgttgcgcccgaactcgccgatgtcggccctgtc
gagctactcaaacagtgcgaccgggcactctaccaggccaaggccgaaggccggaatcgc
gttcatgtggtgcggctcgacgagcgaagggcgacgaccgcgtag
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