Sphingopyxis sp. J-6: V6U71_12035
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Entry
V6U71_12035 CDS
T10764
Name
(GenBank) translocation/assembly module TamB domain-containing protein
KO
K09800
translocation and assembly module TamB
Organism
spjj Sphingopyxis sp. J-6
Brite
KEGG Orthology (KO) [BR:
spjj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spjj02000
]
V6U71_12035
Transporters [BR:
spjj02000
]
Other transporters
Pores ion channels [TC:
1
]
V6U71_12035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
XMG38575
LinkDB
All DBs
Position
complement(2491899..2496128)
Genome browser
AA seq
1409 aa
AA seq
DB search
MADDDAPEIATSDKAPPQSWPLRILRWIGLALLGIVLLFALFLVGLNSDAGRRFVVTQIE
KYEFENGMKIGIGRLDGSLFSAMTIRDFTLSDPKGVFLASPEVKVDWRPLRYLANHIDVR
SATAQTITMQRIPAFKVVPDTGEPLLPDIDIDVGTLRVDRFVFEPAVAGERQEARLNGKI
AIADRRAQVTADAETIGAKAKGDTLKLLLDAVPEANRLAMTLDVNAPQGGVLAAMGGFKE
PLTAKLDGRGDWKAWNGNLTANLGAAPLARLALTARDGTFAIKGTAQASRLLTGPTAEIL
GTETAIDLTARLAERKAAIDGRLSSDAARLGISGGIDLATNRYDGLQLAVNILRPGAIAP
AVRANGLRATAKLDGAFALPTVEYQANANSLAVNDIIVESLSLAGKARVDADQIVIPVAG
RAARIRGLDTVAGGRLVQVRLDGDLAYSNGRILSDNLRLRSPRIDAKAIVIADLNKGFYT
GAIDGRINDYRIESVGIFDIDTDADLKTAPRGGFEIVGRVRARSTRLFNSGVRDFLGGNA
TASSDVRYGTDGIIRFANLRLTAPRLRVTGGQGSYSPNGQIQLAARANSTDYGPVGLQLA
GTISDPRAVVTAARPGLGIGLANLVARINGAPNGYRLAATGDTDYGPLSADVVLLTAAGP
LTIDIERGDLSGIGFNGRLVQSAAGPFTGQLNASGQGLGGLVRLSAAGKYQAAAINVRAN
NVVLPGPAKLAVGSAIVDADVTLYEQPHIVADIQIADTRIRDYDIAVGRVKIDYRDGSGK
AQALVEGTSGVPFRIAANADLQPKLWRASVQGRATGINFRTTSPARIIPGADGYELLPTN
INLGRGSNARVAGRFGDGIMIQSRLDRVNMAILNTVYPDMGLGGRATGSLDFEQANPDAF
PRADARLAIDDFTRTTAASVSQPVDVNFVGKLLTDGGEARAVMRKRGSVIGRLQASLRPL
GPGAGSWMERLQAAPLGGGIRYNGPADTLYSFFGPADQHVTGPIAVAADFSCSVADPCLN
GVVRGKDMVYENQTFGTRLTNMAVNGRFTGNRLEIEQLTATAGDGSIQAKGYISLASADG
YPMNISATLDNARLARSENIAARATGTLTLEKVAGQAALLSGDLRLPETRYKVVLEGAAK
VPVLTGVRRKPPTGRRRVSGDGLAAVGGSLFDLIRLNVRLRAPDEIYVSGMGLESEWQAD
VTLTGTTEAPRVAGEVELVRGTLGFAGRSFELQEGRVTFPTGDAFDPSIRLVASETIETV
TVNVNVSGRAMNPQITFSSVPGLPQDEIVSRILFGDSITSLSPLQAVQLASSLNTLRGGG
GGLSPLGALQSATGIDRLRVLGPDDAVGRGTALAAGQYISKDIYLEVITDARGYTATQLE
ISLSKALSILSQAGGSGQSNLSIRYRKDY
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgacgacgcgcccgaaatcgccacgagcgacaaggcgccgccgcaatcctgg
ccgcttcgcatcctgcgctggatcggtcttgcgctgctcggcatcgtcctgctcttcgcg
ctgttcctcgtgggtctcaacagcgacgccggacggcggttcgtcgtcacccagatcgag
aaatatgaattcgaaaacgggatgaagatcggcatcggccggctcgacgggtcgctgttc
agcgcgatgacgatccgcgatttcaccctgtccgatcccaagggcgtcttcctcgcgtcg
cccgaggtcaaggtcgactggcggccgctgcgctatcttgccaaccatatcgacgtccgt
tcggcgaccgcgcagacaatcaccatgcagcggataccggccttcaaggtcgttcccgat
accggcgagccgctcttgcccgacatcgatatcgatgtcggcaccctgcgggtcgaccgc
ttcgtcttcgagcccgccgttgcgggcgagcggcaggaggcgcgcctgaacggcaagatc
gcgattgccgaccggagggcgcaggtgaccgccgatgccgagacgatcggcgcgaaggcc
aagggcgatacgctgaaactgctgctcgacgcggtgcccgaggcgaaccggctcgcgatg
acgctcgacgtcaacgccccgcaaggcggcgtgctcgccgcgatgggcggcttcaaggaa
ccgctgaccgccaagctcgacgggcgcggcgactggaaggcgtggaacggcaacctcacc
gccaatctcggcgcggcgccgctcgcgcggctggcgctgacggcgcgcgacggcactttc
gcaatcaaaggcaccgcgcaggcgtcgcggctcctcaccggtcctacggcggagatattg
ggcaccgaaacggcgatcgacctcaccgcgcggctcgccgagcgcaaggcggcgatcgac
gggcgcctgtcgtcggatgcggcgcggctcgggatcagtggcggcatcgacctcgcgacc
aaccgctacgacggcctgcaactcgccgtgaacatcctgcgccccggtgcgatcgcgcct
gcggtacgcgcgaacggcttgcgcgcgaccgcgaagctcgacggtgctttcgcgctgccg
acggtcgaatatcaggcgaacgccaacagccttgctgtcaacgatattatcgtcgaaagc
ctgagccttgcgggcaaggcgcgggtcgatgccgaccagatcgtcattccggtcgccggg
cgcgccgcgcggatccgcgggctcgataccgtcgcgggcggcaggctggtgcaggtgcgg
ctcgacggtgaccttgcatacagcaatggccgcattctcagcgacaatctgcgcctgcgt
tcgccgcggatcgatgccaaagcaatcgtcatcgccgatctgaacaagggcttctatacc
ggcgcgatcgacgggcggatcaacgattaccggatcgagagcgtcggcattttcgatatc
gacaccgacgccgatctgaagaccgcgccgcgcggcgggttcgagatcgtcggccgcgtc
cgtgcgcgctcgacgcggctgttcaattcgggcgtgcgcgatttcctcggcggcaatgcc
accgcgtcgagcgacgtgcgttacggcaccgacgggatcatccgctttgccaatttgcgg
ctcaccgcaccgcgcctgcgcgtcaccggcgggcaggggagctattcgcccaacggccag
atccagctcgcggcgcgcgccaattcgaccgactatggccccgtcggcctccagcttgcg
gggacgatcagcgatccgcgcgcggtggtcactgccgcaaggccggggcttggcattggg
ctcgccaatctcgtcgcgcggatcaacggcgcgccgaacggctaccgcctcgccgcgacg
ggcgacaccgattacggtccgctctccgccgatgtcgtgttgctcaccgccgccgggccg
ctgacgatcgatatcgagcgcggcgatttgtcgggaatcggcttcaacggccgcctcgtc
cagagcgccgcagggcccttcaccgggcagctcaatgcgtcggggcagggcctcggcggc
cttgtccgcctgagcgcagccggaaaatatcaggcggcggcgatcaatgtgcgcgccaat
aatgtcgtgctgccgggaccggcaaagctcgcggtcggatcggcgatcgtcgatgccgac
gtcacgctctacgaacaaccgcacatcgtcgccgacatccagatcgccgacacccgaatt
cgcgattacgatatcgctgtcgggcgggtgaagatcgactatcgcgacggcagcggcaag
gcgcaggcgctggtcgagggaacgagcggcgtgccgttccggatcgccgccaacgccgac
ctgcaaccgaaactgtggcgtgcatcggttcagggccgcgcgaccggcatcaatttccgc
accacttcgcccgcacgcatcatccccggcgccgacggatacgaactgctgccgaccaac
atcaacctcggccgcggcagcaacgcgcgcgtcgcaggacgcttcggcgacgggatcatg
attcagagccgcctcgaccgggtcaatatggcgatcctcaacactgtttaccccgacatg
gggctgggcgggcgcgccacgggcagtctcgacttcgaacaggccaatcccgacgccttt
cctcgggccgacgcgcggctggccatcgatgattttacgcgcaccactgccgcgtcggtc
agccagcccgtcgacgtcaatttcgtcggcaaactgctcaccgacggtggcgaggcgcgt
gccgtgatgcgcaagcgcggcagcgtgatcgggcgtctgcaggcctcactgcgtcctctc
ggacccggcgccggaagctggatggaacggctgcaggccgcgccgctcggcggtggcatc
cgctacaacggccccgccgacaccctctattccttcttcggccccgccgaccagcatgtg
acggggccgatcgcggtcgccgccgacttcagttgcagcgttgccgatccgtgcctcaat
ggcgtcgtgcgcggcaaggacatggtctatgaaaaccagacctttggtacccgcctgacc
aacatggccgtcaacggccgcttcaccggcaaccggctggagatcgaacagctcaccgcg
accgccggcgacggcagcattcaggccaagggctacatcagccttgcgtcagcggatggc
tatccgatgaatatctcggcgacgctcgacaacgcccgcctcgcgcggagcgagaatatc
gcggcgcgcgcgacggggacgctgacgctcgaaaaggtcgcggggcaggcggcgctgctg
tcgggtgacctccggcttcccgaaacgcgctacaaggtcgtgctcgaaggcgcggcaaaa
gttcccgtcctcaccggcgtgcggcgcaagccacccacggggcggcgacgggtcagcggc
gacgggcttgcggcggtcggcggcagcctgttcgatcttatccggctcaatgtccgcctc
cgtgcccccgacgaaatctatgtcagcggcatggggctcgaatccgaatggcaggccgac
gtcacgctaaccgggacgacagaggccccgcgcgttgctggcgaggtcgaactggtgcgc
ggcacgctgggatttgccggacgttcgtttgaattgcaggaaggccgcgtaaccttcccg
accggcgatgcctttgatccgtcgatccgcctcgtcgcgagcgagacgatcgagacggtg
acggtgaacgtcaatgtctccggccgtgcgatgaacccgcagatcactttctccagcgtt
ccgggcctcccgcaggacgaaatcgtatcgcgcatcctgttcggcgattcgatcacctcg
ctgtcgccgctgcaggcggtgcagctcgcttcgtcgctcaacacgctgcgcggcgggggc
gggggactgagcccgctcggcgcgctccagtcggcgaccgggatcgaccggctgcgggtc
cttggccccgacgatgccgtcgggcgcggcaccgcgctggcggccgggcaatatatctcg
aaggacatctatctcgaggtgatcaccgacgcgcgcggctacaccgcgacgcagctcgaa
atcagcctgtcgaaagccctttcgatcctcagtcaggccggcgggtcggggcaatcgaac
ctcagcatccgttatcgaaaggattattga
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