Sphingopyxis sp. J-6: V6U71_12445
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Entry
V6U71_12445 CDS
T10764
Name
(GenBank) TlyA family RNA methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
spjj Sphingopyxis sp. J-6
Brite
KEGG Orthology (KO) [BR:
spjj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spjj03009
]
V6U71_12445
Enzymes [BR:
spjj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
V6U71_12445
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
V6U71_12445
Ribosome biogenesis [BR:
spjj03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
V6U71_12445
23S rRNA modification factors
V6U71_12445
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_11
Methyltransf_25
Methyltransf_12
Methyltransf_24
Motif
Other DBs
NCBI-ProteinID:
XMG38655
LinkDB
All DBs
Position
2591137..2591877
Genome browser
AA seq
246 aa
AA seq
DB search
MAKQRADQLLVDRGLAESRTRAQALILAGLAFVGDRKIDKAGQQVAEDAEISVKGRDHPW
VSRGGVKLDHALSHLGWDVTGAVAIDVGSSTGGFTDVLLSRGAARVYAVDSGTNQLAWKL
RQDGRVVVHEQTSARILTPAHIPEPVDLIVCDASFIALSKVLPVPLSFAKDGARLVALIK
PQFEAERHEVGKKGVVRDTAVHARVCAEVRGWLESENWRVADLVESPITGPEGNVEFLIA
ATKSAA
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcagcgcgccgaccagttgctcgtcgaccgcggcctcgccgaaagccggacg
cgggcgcaggcattaatcctcgccgggctcgccttcgtcggcgaccgcaagatcgacaag
gcagggcagcaggtcgccgaggatgccgagatcagtgtcaagggccgcgaccatccgtgg
gtgtcgcgcggcggcgtcaaactcgaccatgcgctgagccacctcggctgggacgtgacg
ggcgcggtcgcgatcgacgtcggatcgtcgaccggcggctttaccgacgtgctgctcagc
cgcggcgcggcgcgcgtctatgccgtcgattcgggcaccaaccagctcgcgtggaaattg
cggcaagacgggcgcgtcgtcgtccacgaacaaacgagcgcgcgtatcctgacgcccgcg
catatccccgaacccgtcgatctgatcgtctgcgacgccagcttcatcgccctgtcgaaa
gtgctcccggtgccgctgtccttcgcgaaagacggcgcccgccttgtcgcgctgatcaag
ccgcagttcgaggccgaacgccacgaggtcggcaaaaagggcgtcgtgcgcgataccgcc
gtccatgcgcgcgtctgcgccgaagttcgcggctggctcgaaagcgaaaactggcgcgtc
gccgatctggttgaaagcccgatcaccggccccgagggcaatgtcgaattcctgattgcg
gccacaaaatctgcggcttga
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integrated database retrieval system
