KEGG   Sphingopyxis sp. J-6: V6U71_12905
Entry
V6U71_12905       CDS       T10764                                 
Symbol
trbB
Name
(GenBank) P-type conjugative transfer ATPase TrbB
  KO
K20527  type IV secretion system protein TrbB [EC:7.4.2.8]
Organism
spjj  Sphingopyxis sp. J-6
Pathway
spjj02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:spjj00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    V6U71_12905 (trbB)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:spjj02044]
    V6U71_12905 (trbB)
Enzymes [BR:spjj01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     V6U71_12905 (trbB)
Secretion system [BR:spjj02044]
 Type IV secretion system
  Trb secretion system protein
   V6U71_12905 (trbB)
SSDB
Motif
Pfam: T2SSE Zeta_toxin TrwB_AAD_bind AAA_19 AAA_16 AAA_7 FtsK_SpoIIIE ABC_tran nSTAND3 ResIII AAA_22 nSTAND_NTPase5 DEAD P-loop_TraG DUF815 CbiA ATPase MMR_HSR1 AAA_29 Sigma54_activat AAA_28 SLFN-g3_helicase GTP_EFTU AAA_30 RsgA_GTPase DUF87 TsaE AAA_25 IstB_IS21 PduV-EutP PIF1 Septin ABC_ATPase Mg_chelatase AAA_10 MobB cobW AAA_18 AAA SRP54 AAA_11 RNA_helicase UvrD-helicase SRPRB Parvo_NS1
Other DBs
NCBI-ProteinID: XMG38742
LinkDB
Position
complement(2684801..2685781)
AA seq 326 aa
MGAAPTGNEPQSRGARMLRTALGGAIAEWLADPSVIEIMLNPDGRLWVDRLGIGIADSGI
LLAGADGERIIRLVAHHVGAAVHAGSPRVSAELPETGERFEGLLPPVVAAPTFAIRKPAV
AVFSLHDYAVAGIMSDLSAEILRCAVSERKNILVAGGTGTGKTTLTNALLAEVAKTSDRI
VLIEDTRELQCAAPNLVAMRTKDGVATLADLVRSSLRLRPDRIPIGEVRGAEALELLKAW
GTGHPGGIGTIHAGTALGALRRMEQLIQEAVVTVPRALLAETIDLVAVLIRDGTGRRLSE
LTRVDGLDPATGEFCITPLIKPEGEL
NT seq 981 nt   +upstreamnt  +downstreamnt
atgggcgcagcaccgaccggcaacgagccgcagtcacgcggcgcgcgcatgctccggacc
gcgcttggcggcgccatcgccgaatggctggccgacccctcggtcatcgagatcatgctc
aaccccgatggtcggctttgggtggaccggctgggcatcggcatcgccgacagcggcatc
cttctcgccggggccgatggcgaacgcattattcgcctcgtcgcgcatcatgtcggcgcc
gcggtccacgcgggctcgccgcgcgtttctgccgaactcccggagaccggcgagcgcttc
gaagggctgttgccgccggtggtggcagcgccgaccttcgccatccgcaagcccgccgtc
gcggtgttcagccttcacgattatgcagtcgccggtatcatgtcggacctctcggccgag
atcctccgctgtgcagtgtccgagcggaaaaatattctggtggcgggcggtaccggcacc
ggaaaaaccacgctcaccaacgcgttgctcgccgaagttgcgaagacctcggatcgtatc
gtgctgatcgaggatacgcgcgagcttcaatgcgccgcgcccaatctcgtcgcgatgcga
acgaaggacggcgtggcgacgctcgcggacctcgtccgctcttcgctccgcctgcggcct
gatcgcatcccgatcggcgaagtccggggagcagaggcgctcgagcttctgaaggcttgg
ggcacgggtcaccccggcggcatcggcacgatccatgccgggaccgccctcggcgctttg
cgccggatggagcagcttattcaggaggccgtggtgacggtcccgcgcgcgctgctcgcc
gagacgatcgaccttgtcgccgtgctgatacgcgacggtaccgggcgccgcctttccgaa
ctcacccgtgtcgatggtctggaccctgcgaccggcgagttctgcatcaccccgctcatc
aagcccgaaggagaattatga

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