Sphingopyxis sp. J-6: V6U71_13470
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Entry
V6U71_13470 CDS
T10764
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
spjj Sphingopyxis sp. J-6
Brite
KEGG Orthology (KO) [BR:
spjj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spjj03400
]
V6U71_13470
Enzymes [BR:
spjj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
V6U71_13470
DNA repair and recombination proteins [BR:
spjj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
V6U71_13470
Prokaryotic type
V6U71_13470
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
XMG38851
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Position
2775965..2777338
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AA seq
457 aa
AA seq
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MPPAILWLRQDLRTTDHPALLAAIAEGPVIPLYILDDESPETRAIGGAQRWWLHHSLAAH
DASLRKRGSRLVLRRGPAAEIVERVAAEAGSTRVHATRCYEPWWRRCENALDARLALRLH
DGNYLAPPESIINAQGARYRVFTPWYRALLGRMPPALPYAAPDHIPAPDVWPTSDNLADW
GLTPTSPDWASGFDDWHPGEKGAWRALRDWLPLAGDYKARRDFPSLPATSRLSPHLHFGE
ISPRSIWHALGERDDAGAETFRSELGWREHGINLVDQMPDYGDRNGRPTFDDFGWRSGPG
ADRDFAAWTRGRTGYPVVDAGMRELWRTGWMHNRVRMVTASFLVKHLLIDWRRGERWFWD
TLLDADLGSNAMNWQYVAGTGVDAPVFSRIMSPLLQSERFAMGDYVRTYVPELSHLSDAE
ITAAHGQDARVPAYPAPLIGHEAARARALAAWEALRS
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccgccatcttgtggctccgtcaggacctccgcaccaccgaccatccggcgctt
ctcgcggcgatcgccgaaggtccggtcattccgctctacatattggacgacgagagcccc
gaaacgcgcgcgatcggcggcgcgcagcgctggtggctccatcacagcctcgccgcgcac
gatgcgagccttcgcaaacgcggcagccggctcgtcctgcgccgcggccctgccgccgaa
atagtcgaacgcgtcgcggcggaagccgggagcacaagggttcacgcgacccgctgctac
gagccctggtggcggcgctgcgaaaacgcgctggacgccaggcttgcgctgcggctccat
gacggcaattatcttgcgccgcccgagagtatcatcaatgcgcaaggcgcgcgctaccgc
gtcttcacgccatggtatcgcgcgctcctgggacgcatgccgcccgcccttccctatgcc
gcgcccgaccatattccggctcccgacgtctggccgacgtcggacaatctcgccgattgg
ggtctgaccccgaccagccccgactgggcctcgggatttgacgactggcacccgggcgag
aaaggtgcctggcgcgcgctgcgcgactggctgccgcttgccggcgactacaaggcccgc
cgcgactttccttcgctccccgcgacatcgcggctgtcgccgcatcttcatttcggcgag
atcagcccccggtcgatctggcatgcgctcggcgagcgcgacgatgcgggcgccgagacc
tttcggtcggagcttggctggcgcgaacatggcatcaatctcgtcgaccagatgcccgat
tatggcgatcggaacgggcgccccaccttcgatgatttcggctggcggagcggccccgga
gccgaccgggacttcgccgcctggacccggggaaggaccggctacccggtggtcgacgcg
ggcatgcgcgagctctggcgcacgggctggatgcacaaccgcgtgcggatggtcaccgcc
tccttcctcgtcaaacatctgctgatcgactggcgccgcggtgagcgctggttctgggat
acgctgctcgacgccgatctcgggtcgaatgcaatgaactggcaatatgtcgcgggcacc
ggcgtcgacgcgccggtcttctcgcgcatcatgtcgccgctgctccagagcgagcggttc
gcgatgggcgattatgtccgcacttatgttccggagctttcgcatctgtcggacgccgag
atcaccgccgcccatggtcaggatgcgcgggtgcccgcctatcccgcgccgctgatcggt
catgaggcggcgagggcgcgggccctcgctgcttgggaagccctgcgcagctag
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