Sphingopyxis sp. J-6: V6U71_13980
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Entry
V6U71_13980 CDS
T10764
Symbol
gatB
Name
(GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
spjj Sphingopyxis sp. J-6
Pathway
spjj00970
Aminoacyl-tRNA biosynthesis
spjj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spjj00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
V6U71_13980 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
spjj03029
]
V6U71_13980 (gatB)
Enzymes [BR:
spjj01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
V6U71_13980 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
V6U71_13980 (gatB)
Mitochondrial biogenesis [BR:
spjj03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
V6U71_13980 (gatB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
DUF7224
Motif
Other DBs
NCBI-ProteinID:
XMG38947
LinkDB
All DBs
Position
complement(2880605..2882071)
Genome browser
AA seq
488 aa
AA seq
DB search
MSDYRIKGETGEWEVVIGLEVHAQVTSNAKLFSGAATAFGAEPNTQVSLVDAAMPGMLPV
PNRECIRQAVRTGMAIEAEINKWSRFDRKNYFYADLPQGYQISQLYHPLVGEGSLMIEED
EKAGIPEPKRIGIERIHVEQDAGKLMHDQHPTMSYVDLNRSGVALMEIVSRPDMRSPAEA
GAYVRKLRSILRYVGSCDGNMEEGSMRADVNVSVRKPGDEFGTRTETKNVNSVRFVMAVI
EGEARRQVELIESGGSVVQETRLYDPDRNETRSMRSKEDAHDYRYFPDPDLLPLELDDAF
LAECRESLPELPDAKRARYLAAGISAYNADVLTAEVESALWFDTLLETGAKPAAAANWVS
SELFGALNRLGKSFEDCPVTPAQAGELLGLVADGTISGTIAKQVFEKMLESGDGAAAIVD
REGLKQTSDTGAIEAEIAKVLAANADKVEQYKGGKEALFGFFVGQTMKAMQGKANPQVVN
ELLKKALA
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattatcgcatcaagggcgaaaccggcgagtgggaggtcgtgatcggcctcgag
gtccatgcgcaggtcacctccaacgccaagctgttctcgggcgccgcgacggcgttcggg
gccgagcccaatacgcaggtgtcgctcgtcgacgctgcgatgcccggcatgctgccggtg
ccgaaccgcgaatgcatccgccaggcggtgcgcacggggatggcgatcgaggccgagatc
aacaaatggtcgcggttcgaccgcaagaattatttctacgccgacctgccgcagggctac
cagatttcacagctttatcatccgcttgtcggcgaaggttcgctgatgatcgaggaggat
gagaaggccgggattcccgagcccaagcggatcgggatcgagcgcatccatgtcgagcag
gacgccggcaagctgatgcacgaccagcatccgacgatgtcctatgtcgatctcaaccgc
tcgggcgtcgcgctgatggagatcgtctcgcgccccgacatgcgctcgcccgccgaggcc
ggggcctatgtgcgcaagctgcggtcgatcctgcgctatgtcggatcgtgcgacggcaat
atggaagaaggctcgatgcgcgccgacgtcaacgtgtcggtccgcaagccgggcgacgaa
ttcgggacgcgcaccgagacgaagaatgtcaattcggtgcgcttcgtgatggcggtgatc
gagggcgaggcgaggcgccaggtcgagctgatcgaaagcggcggctccgtggtgcaggaa
acgcggctctacgaccccgaccgcaacgagacgcgctcgatgcggtcgaaggaagatgcg
catgattaccgctacttcccggatcccgacctgctgccgctcgaactcgacgatgcgttt
ctggccgagtgccgcgagagcttgcccgaactgcccgatgccaagcgcgcgcgctatctg
gcagccggaatttcggcgtataacgccgatgtgctgaccgccgaggtcgagagcgccttg
tggttcgatacgctgctggaaaccggcgcgaagccggctgcggcggcgaactgggtatcg
agcgagctgttcggggcactcaaccgcctcggcaagagcttcgaggattgcccggtcacc
ccggcgcaggcgggcgaactgctcgggctcgtcgccgacggcacgatttcgggcacgatc
gcgaagcaggtgttcgagaagatgctcgaaagcggtgacggcgcggccgccatcgtcgat
cgcgaggggctgaagcagaccagcgacaccggcgcgatcgaggccgagatcgccaaggtc
ctcgccgccaatgccgacaaggtcgagcagtataagggcggcaaggaagcgctgttcggc
ttcttcgtcggtcagacgatgaaggcgatgcagggcaaggcgaacccgcaggtcgtcaac
gagctgctcaaaaaagcgctcgcttga
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