Sphingopyxis sp. J-6: V6U71_16105
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Entry
V6U71_16105 CDS
T10764
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
spjj Sphingopyxis sp. J-6
Brite
KEGG Orthology (KO) [BR:
spjj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spjj02000
]
V6U71_16105
Transporters [BR:
spjj02000
]
Other transporters
Pores ion channels [TC:
1
]
V6U71_16105
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
XMG39357
LinkDB
All DBs
Position
complement(3369517..3371703)
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AA seq
728 aa
AA seq
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MATVSALALLPGVAAAQSTIQSSAGQPSSGEASGDAEIVVTALRNEQTLGTVPLGISAIS
AEKLEERAAKSMADFVALTPGLNLQSIGAAGNGVVAIRGISPQAVAGTVATYIDEVPISS
SGIGARGGLYQPDLDPNDIERVEVLKGPQGTLYGASSLGGVIKYVLKKPSLTETDIHLSE
GLTMFDNGEPGIALRASATTPLITDKLGVRVSAFYRHDPGFVDDVLLGGRNVNDANAWGV
RGGLYWKPVDNVSVDLSAMIQQTNSQGFSTVDLDWQTFEPLYGKDTQLRAVPEYLKVRTE
FYSATLKWDTGAGTLLSSTGYAYVAPRDQGDMTYNYTGTGGPIEYGTPGAARGSHINKQF
SQEIRFSSNRFGPVEFTVGGFFQRAKTDDRYDYLTFTEGGVVDPNAPLLGQNYASGVGKE
YAGFINGNLYLTEQFDISAGYRYSHIEQTRSSVRGGAFLYGVPPFSLTDSRSTEENKSTY
QIGARWRPSDDLMFYVRAASGYRPGGTRGVPPTAPPGTSPSYTSDTIWSYEAGMKVKALD
GRLTFDADVYRIDWSDIQTLVYFGFFNTVGNGGKARSEGGEIQATFEPVKGLTLTANGGY
TNARFTEDAPEVAVTKGLPIYYVPKWTATFGADYGWELANGLRANIGGDYAYRSSQLDAT
RFRLPGYSILNLRAGVKGDSFGVNLYVKNVTDKRALVGTSQGYYEFFNPFVVVVNEPRSY
GITLTQNF
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgtttcggccctggcgttgctgccgggcgtggctgcggcccagtcgaccatc
cagtcttcggccggccagccttcgagcggcgaagcatccggcgacgcggaaatcgtcgtg
accgcccttcgcaacgaacagacgctcggcaccgtcccgctcggtatttccgctatctcg
gccgagaagctcgaagaacgtgcggcaaagagcatggccgactttgtggcgctgaccccg
gggctcaacctccagtcgatcggcgcggcgggcaacggtgttgtcgcgatccgcggtatt
tcgccgcaggcggtggccggcactgtcgcaacctatatcgacgaggtaccgatcagcagc
tcgggcatcggcgcgcgcggcggcctctatcagcccgacctcgatcccaacgacatcgag
cgcgtcgaagtgctcaaaggcccgcagggtaccctgtatggcgcgtcctcgctcggcggc
gtgatcaaatatgtgctgaagaagcccagcctgaccgagaccgacatccatctgtcggaa
ggcctcaccatgttcgacaatggcgagcccggcatcgcgctccgcgcatcggcgacgacg
ccgttgatcaccgacaagcttggtgtccgggtcagcgccttctaccgccacgatccgggg
ttcgtcgacgacgtgctgctcggcgggcgcaacgtcaacgatgccaatgcatggggcgtg
cgcggcggtctctactggaagcctgtcgacaatgtcagcgtcgacctttcggcgatgatc
cagcagaccaattcgcagggcttctcgacggtcgacctcgactggcagacgttcgagccg
ctttatggcaaggatacgcagctccgcgcggttcccgaatatctgaaggttcgcaccgaa
ttctattcggccacgctgaaatgggacaccggcgccggtacgctcctgtcgtcgacgggt
tatgcctatgtcgcgccacgcgatcagggggacatgacctacaactatacgggcaccggc
gggccgatcgaatatggcacgcccggcgccgcgcgcggcagccacatcaacaagcaattc
tcgcaggaaatccgtttcagctcgaaccgcttcggaccggtggagttcacggttggcggc
ttcttccagcgcgcgaagaccgacgaccgctatgattatctgaccttcaccgaaggcggc
gtcgtcgacccgaatgcgccgctgctcggccagaattacgcgagcggcgtcggcaaggaa
tatgccggtttcatcaacggcaacctttatctgaccgagcagttcgatatttcggccggc
taccgctacagccatatcgagcagacgcggagcagcgtgcgcggcggcgcatttctgtac
ggcgttccgcccttttcgctcaccgacagccgctcgaccgaagagaacaagagcacgtac
cagatcggtgcgcgctggcgtccgtcggacgatctgatgttctacgtccgcgcggcgagc
ggctatcgccctggcggcacgcgcggcgttccccccacggcgcctccgggaacctcgccc
tcctatacctcggacaccatctggagctacgaggccggcatgaaggtcaaggcgctcgac
ggccgcctgaccttcgatgccgacgtctaccggatcgactggtcggacatccagaccctc
gtctacttcggtttcttcaataccgtcggcaacggcggcaaggcacgcagcgaaggcggc
gagattcaggcgaccttcgaacccgtcaagggcctcaccctgacggcgaacggcggctac
accaacgcccgcttcaccgaggacgcgcctgaggtcgccgtgaccaaggggcttcccatc
tattatgtgccgaagtggacggcgaccttcggcgccgactatggctgggagctcgccaac
ggcctccgggcgaacatcggcggcgattatgcctatcgctcgtcgcagctcgacgcgacg
cggttccggctgcccggctattcgatcctgaacctgcgcgccggcgtcaagggcgacagc
ttcggggtgaatctctacgtcaagaacgtcaccgacaagcgggcgctcgtcggtacctcg
cagggctactatgaattcttcaacccgttcgtggtggtggtcaacgaaccgcgttcttat
ggcattacgctgacccagaacttctga
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