KEGG   Sphingopyxis sp. J-6: V6U71_16845
Entry
V6U71_16845       CDS       T10764                                 
Name
(GenBank) type II toxin-antitoxin system VapC family toxin
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
spjj  Sphingopyxis sp. J-6
Brite
KEGG Orthology (KO) [BR:spjj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:spjj03016]
    V6U71_16845
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:spjj02048]
    V6U71_16845
Transfer RNA biogenesis [BR:spjj03016]
 Prokaryotic type
  tRNA degradation factors
   V6U71_16845
Prokaryotic defense system [BR:spjj02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    V6U71_16845
SSDB
Motif
Pfam: PIN
Other DBs
NCBI-ProteinID: XMG39499
LinkDB
Position
complement(3536182..3536562)
AA seq 126 aa
MSRYLIDTDCAVYAMTAQFPALGGRLSNCEPGEAAISAVSFAEVALGSELGKPPPPEILE
AFVRAIPILPFDEAAAREYARLPFKRARFDRLLAAHALSIGATIITNNEADFADVPGLKV
ENWTLS
NT seq 381 nt   +upstreamnt  +downstreamnt
gtgagccgctatctgattgatacagattgcgcggtctatgccatgacagcgcagtttccc
gcgttgggcgggcgtttgtccaactgtgagcccggcgaagctgccatctccgcggtcagt
ttcgcggaggtggccttgggctcggaactgggaaagcctccgccgccggagattctggag
gcgttcgtccgagccattccaatcctaccattcgacgaagctgcagcgcgagaatatgcc
aggttacccttcaaacgagcgcgcttcgatcgtttgcttgccgcccatgcactcagcatt
ggtgcgacgattatcactaacaatgaagctgattttgccgatgtgccgggattaaaggtg
gagaactggacgctgtcatga

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