Sphingopyxis sp. J-6: V6U71_17380
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Entry
V6U71_17380 CDS
T10764
Symbol
sucC
Name
(GenBank) ADP-forming succinate--CoA ligase subunit beta
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
spjj Sphingopyxis sp. J-6
Pathway
spjj00020
Citrate cycle (TCA cycle)
spjj00640
Propanoate metabolism
spjj00660
C5-Branched dibasic acid metabolism
spjj00720
Other carbon fixation pathways
spjj01100
Metabolic pathways
spjj01110
Biosynthesis of secondary metabolites
spjj01120
Microbial metabolism in diverse environments
spjj01200
Carbon metabolism
Module
spjj_M00009
Citrate cycle (TCA cycle, Krebs cycle)
spjj_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
spjj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
V6U71_17380 (sucC)
00640 Propanoate metabolism
V6U71_17380 (sucC)
00660 C5-Branched dibasic acid metabolism
V6U71_17380 (sucC)
09102 Energy metabolism
00720 Other carbon fixation pathways
V6U71_17380 (sucC)
Enzymes [BR:
spjj01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
V6U71_17380 (sucC)
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Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
Phage_tube_2
Motif
Other DBs
NCBI-ProteinID:
XMG39600
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Position
complement(3645178..3646386)
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AA seq
402 aa
AA seq
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MNIHEYQAKELLAKFGVAVPKGIAAMSVEEAVAAAKQLPGPLYVVKSQIHAGGRGKGKFK
ELGPDAKGGVRLAKSIEEVEAHAKDMLGNTLVTIQTGEAGKQVNRLYITDGADIKQEFYL
ALLVDRASSRIAVVASTEGGMDIETVAHDTPEKIHTITIDPATGLQPHHGRSVAAALGLE
GDLAKQAAKVLAGLYAAFLGTDAEQIEINPLAVCAGKDGDELLVLDAKVGFDGNAMFRHK
DLAELRDLTEEDPAEVEASEYDLAYIKLDGNIGCMVNGAGLAMSTMDIIKLNGEFPANFL
DVGGGASKEKVTAAFKIILKDPAVKGILVNIFGGIMKCDIIADGIVAAAKEVNLSVPLVV
RLEGTNVQQGKDILANSGLPIVAANDLGDAAKKIVAEVRAVA
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgaacatccacgaatatcaggcgaaagaactgctcgcgaaatttggcgtcgccgtgccc
aagggcattgccgcgatgagtgtcgaggaagccgtcgccgcggcgaagcagctccccggg
ccgctctatgtcgtcaagtcgcagatccacgcgggcggccgcggcaagggcaagttcaag
gagctcggccccgatgcgaaaggcggtgtccgccttgccaagagcatcgaggaagtcgaa
gcgcatgccaaggacatgctcggcaacacgctggtgacgatccagaccggcgaagccggc
aagcaggtcaaccgcctgtacatcaccgacggcgccgacattaagcaggaattctatctc
gcgctgctcgtcgaccgcgccagcagccgcatcgcggtcgtcgcctcgaccgagggtggc
atggacatcgaaaccgtcgcgcacgacacgccggaaaagatccacacgatcaccatcgat
cccgccacgggcctccagccgcaccatggccgcagcgtcgccgcggcactcgggctggaa
ggcgacctcgcaaagcaggccgccaaggttctcgccgggctgtatgcagccttcctcggc
accgacgccgaacagatcgaaatcaacccgctcgccgtgtgtgcaggcaaggatggtgac
gaactgctcgtccttgatgccaaggtcgggttcgacggcaatgccatgttccgccacaag
gacctcgccgaactgcgcgacctgaccgaagaagacccggccgaggtcgaggcgtcggaa
tatgacctcgcctacatcaagctcgacggcaacatcggctgcatggtcaacggcgccggc
ctcgcgatgtcgacgatggacatcatcaagctgaacggcgaatttcccgccaacttcctc
gacgtcggcggcggcgcgagcaaggaaaaggtcaccgcggcgttcaagatcattctcaag
gatcccgccgtgaagggcatcctcgtcaatatcttcggcggcatcatgaagtgcgacatc
atcgccgacggcatcgtcgcggcggcgaaggaagtgaacctctcggttccgctcgtcgtt
cgcctcgaaggcaccaacgtccagcagggcaaggacatcctcgccaactcgggactgccg
atcgttgcggccaacgatctcggcgacgcggcaaagaagatcgtcgcggaagttcgcgcg
gtcgcgtga
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