Sphingopyxis sp. J-6: V6U71_17425
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Entry
V6U71_17425 CDS
T10764
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
spjj Sphingopyxis sp. J-6
Pathway
spjj00061
Fatty acid biosynthesis
spjj00071
Fatty acid degradation
spjj01100
Metabolic pathways
spjj01212
Fatty acid metabolism
spjj02024
Quorum sensing
spjj04146
Peroxisome
Module
spjj_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
spjj00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
V6U71_17425
00071 Fatty acid degradation
V6U71_17425
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
V6U71_17425
09145 Cellular community - prokaryotes
02024 Quorum sensing
V6U71_17425
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
spjj01004
]
V6U71_17425
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spjj04147
]
V6U71_17425
Enzymes [BR:
spjj01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
V6U71_17425
Lipid biosynthesis proteins [BR:
spjj01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
V6U71_17425
Exosome [BR:
spjj04147
]
Exosomal proteins
Exosomal proteins of breast milk
V6U71_17425
Exosomal proteins of breast cancer cells
V6U71_17425
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
XMG39609
LinkDB
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Position
3657563..3659233
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AA seq
556 aa
AA seq
DB search
MDSPYDWSTNYRHPTAWDQEFAPLSLPDMLATSVARRGDAPMLDFLGRRFGYAEVANGAA
RVARGLQQRGIGKGSRVGLFLPNVPHYVAAYYGALAAGATVVNFSPLYTVAELEAQVEDS
GTDILFTISAAALLPTALAVLDGSSLRHLVVGSVAGGLPAAKSMLYRLFKRKETAPLPGD
PRITRFSALVANDGRPDPVAIDPATDIALIQYTGGTTGTPKGAKLTHQNLTANARQVNAI
DPDHDAEDRILGVLPFFHVFANTCVLNRTVLNGGTITMLPRFDAKQALEAITRTKTTALP
GVPTMYQALLDHPDLAKTDFSSLRVCISGGAPMPAELREKFVAATGASLVEGYGLTESSG
VVATNPYDGPVKPGTIGQPLPATHLRLVDKEDPMRAAPAGEPGELVVKGPQIMQGYWNRP
DADKDSFTEDGWLRTGDVATIDADGYVRIVDRLKDMIAVGGFKVYPSVIEAHLHEHPAVK
EAIVLGVPDAYRGEVPKAFVTLEDGFSATGEELAAWLNPQLGKHERVSTVEVRLNLPKTM
IGKLDRKALRAEEAAA
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggacagcccttatgactggtcgaccaattaccgccatccgacggcttgggatcaggag
tttgcgccgctgtcgcttccggacatgctggccaccagcgtcgcgcggcgcggcgatgcg
ccgatgctcgactttctcggccgccgcttcggctatgccgaggtcgcgaacggcgccgcc
cgcgtcgcgcgcggcttgcagcagcgagggatcggcaagggcagccgtgtcggcctgttc
ctccccaatgtcccgcactatgtcgccgcttattatggcgcgctggccgccggcgcgacg
gtggtcaatttctcgccgctctacaccgtcgccgagctggaagcacaggtcgaggattca
ggcaccgacatcctgttcacgatcagcgccgcggcgctgctgccgaccgcgctcgcggtg
ctcgacgggtcgagcctgcgccaccttgtcgtcggttcggtcgcgggcgggctgcccgcc
gccaagtcgatgctctatcgcctgttcaagcgcaaggagaccgcgccgcttcccggcgac
ccgcgcatcacgcgtttttcggcgctggtcgccaatgacggccgccccgatccggtggcg
atcgatcccgcaaccgatatcgcgctgattcaatataccggcggcaccaccggcacgccg
aagggcgccaagctgacgcaccagaatctgaccgccaacgcgcggcaggtgaatgcgatc
gatccggatcacgacgccgaggaccgcatcctcggcgtcctccccttcttccatgtcttc
gccaacacctgcgtcctcaaccgcaccgtccttaacggcgggacgatcacgatgctgccg
cgcttcgacgcgaaacaggcgctggaagcgatcacgcggacgaaaacgaccgccctgccc
ggggtgccgacgatgtaccaggcgctgctcgatcaccccgatcttgccaaaaccgatttc
tccagcctgcgcgtctgcatctcgggcggcgcgccgatgcccgccgaactccgcgaaaaa
ttcgtcgccgccaccggggcgtcgctggtcgaaggctatggcctcacagaaagctcgggc
gtcgtcgcgaccaatccctatgacggaccggtcaagcccggcacgatcggccagccgcta
cccgccacgcacctgcgccttgtcgacaaggaggacccgatgcgggcggcgccggcgggc
gagcccggcgagctggtggtcaagggaccgcagatcatgcagggctattggaaccgcccc
gacgccgacaaggacagcttcaccgaagacggctggctgcgcaccggcgacgtcgcgacg
atcgacgccgacggctatgtccgcatcgtcgaccggctgaaggacatgatcgcggtcggc
ggcttcaaggtctatccgagcgtgatcgaggcgcatcttcacgaacatccggcggtgaag
gaagcgatcgtacttggcgtccccgatgcctatcgcggcgaagtgccgaaggcgttcgtg
acgctcgaggacgggttcagtgccaccggcgaggaacttgccgcgtggctcaacccgcag
ctcggcaaacacgagcgggtcagcacggtcgaggtgcggctcaatctgccgaaaacgatg
atcggcaagctcgaccgcaaggcgctgcgggcggaagaagcggccgcgtag
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