Sphingopyxis sp. J-6: V6U71_18560
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Entry
V6U71_18560 CDS
T10764
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
spjj Sphingopyxis sp. J-6
Brite
KEGG Orthology (KO) [BR:
spjj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spjj03000
]
V6U71_18560
Transcription factors [BR:
spjj03000
]
Prokaryotic type
Helix-turn-helix
LacI family
V6U71_18560
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Ortholog
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GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
AIRS
MerR
HTH_Tnp_ISL3
WD_LRWD1
HTH_3
Motif
Other DBs
NCBI-ProteinID:
XMG39829
LinkDB
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Position
complement(3894549..3895562)
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AA seq
337 aa
AA seq
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MATIKMVAERAGVSTATVSRALSEPDLVQPETRRRVQDAIDVLGYVPNFAAKSLRTLRTR
KIVVMVPDVSNPFFAEVIRGAEDAAQAAGYSLLLGDTRDDADREAQYADMLLRKEADGLI
FLGHRVPGKLGKLIQQKGFSAPVVNACDFSPALGVASVHIDNARAAADAINLLLSMGHRR
IALLAGPDSSHLTRERLEGARRAAAMAGVADQLVVAHGDYTLESGVALAAAVFDTDTPPT
ALFCFSDEVAIGALATCRDRGIVCPDDVSIVGFDDVRYARFQSPPLTTIRQPMKRIGMEA
VELLLAVLNGSAGERPWITLPHDLVVRGSTGPATQRR
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
gtggcgacgatcaagatggtggcggaacgtgcgggggtctcgacggcgaccgtatcgcgc
gcgctcagcgagcccgacctcgtccagcccgagacgcgtcgccgcgtccaggatgcgatc
gacgtgctcggctatgtcccaaatttcgcggccaaaagcttgcgcacactgcggacgcgt
aagatcgtcgtgatggtccccgacgtctcgaaccccttcttcgccgaagtgatacgcggc
gccgaggatgcggcgcaggcggcgggctattcgctgctgctcggcgatacccgcgacgac
gcggatcgcgaggcgcaatatgccgacatgctgctccgcaaggaagccgacgggctcatc
tttctcggccaccgcgtgccaggaaagctcggcaagctgatccagcaaaagggtttttcg
gcgcccgtggtcaatgcatgtgatttttcgccggcgcttggcgtggcgagcgtccatatc
gacaatgcgcgcgccgcggccgatgcgatcaatcttctgctctcgatggggcatcgccgg
atcgcgctgctggccggccccgacagcagccatttgacgcgcgagcggctcgaaggcgct
cgccgtgccgcagccatggcgggtgtcgccgatcagttggtcgtcgcgcatggcgactat
accctcgagtccggcgtcgcgcttgcggctgcggttttcgacaccgacacgcccccgacc
gcgctcttctgtttcagcgacgaggtcgcgatcggcgcgcttgcgacctgccgcgaccgc
gggatcgtttgccccgacgacgtctcgatcgtcggcttcgacgacgtgcgttatgcacgg
ttccagagccccccgctgacgacgatcaggcagccgatgaagcggatcgggatggaagcg
gtcgagcttctgctggcggttctgaacggcagcgcgggcgaacgtccctggatcacgctg
ccgcacgatctggtcgtgcgcgggagcaccgggcctgccacgcagcgccgatag
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