Sphingopyxis sp. J-6: V6U71_18810
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Entry
V6U71_18810 CDS
T10764
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
spjj Sphingopyxis sp. J-6
Pathway
spjj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spjj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
V6U71_18810 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spjj03400
]
V6U71_18810 (ung)
Enzymes [BR:
spjj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
V6U71_18810 (ung)
DNA repair and recombination proteins [BR:
spjj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
V6U71_18810 (ung)
Prokaryotic type
V6U71_18810 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
XMG39875
LinkDB
All DBs
Position
complement(3955711..3956424)
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AA seq
237 aa
AA seq
DB search
MAEVKLHPDWLARIGGEFEQPYMAALKQFLADERAKGKAIYPRPRDWFAALDATPPHDVR
VVILGQDPYHGPGQAHGLCFSVQPGVRTPPSLVNIYKEMESDLGIARARHGYLKHWAEQG
VLLLNNCLTVEAGQAASHQGKGWEKFTDAAVAAVAADPAPKVFILWGSHAQKKAANVPGL
GAGSPHLILRAPHPSPLSAHNGFFGSRPFSQANAFLEAHGRGAIDWRLPDDPGHAPG
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggtcaaactccatcccgactggctcgcccgtatcggcggcgagttcgaacag
ccctatatggcggcgctcaagcaatttctcgcggacgagcgggcaaagggcaaggcgatc
tatccgcgcccgcgcgactggtttgccgcgctcgacgcgaccccgccgcacgatgtgcgc
gtcgtgatcctcgggcaggatccctatcacgggccggggcaggcgcacggcctgtgcttt
tcggtccagccgggggtgcgcaccccgccgagcctcgtcaacatctacaaggagatggaa
agcgacctcggcatcgcccgcgcccgccatggatatctgaagcattgggccgaacagggc
gtgctgctgctcaacaattgcctgaccgtcgaggcgggacaagcggcgtcgcatcagggc
aaggggtgggagaagttcaccgacgccgcggtcgcggcggtcgcggccgatccggcgccc
aaggtgttcatcctgtggggcagccatgcgcagaagaaggcggcgaacgtgccggggctg
ggggcggggagcccgcacctgatcctgcgcgcgccgcatccgtcgcccctgtcggcgcac
aacggttttttcgggtcgcggccgttcagtcaggccaatgcctttctggaagcgcatggg
cgcggcgcgatcgattggcggcttcccgacgaccccgggcacgccccgggatga
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